CX294778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294778 vs. ExPASy Swiss-Prot
Match: WDR44_BOVIN (WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.595e-19 Identity = 51/155 (32.90%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 6 YFISGSIDGKVRIWEVRRCQVVDYTDI---REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQKQI-CLQGKKKLPGKRITGFQFSPSDPSKVIVTSADSLVRVLCGENVVGKFKASAFRVAGSQMFATFTSDGKHVVSPSEDSNIYIWN 458 YF+SGS+DGK+R+W + +V + ++ ++++A +C +GK ++GT G C FYD + + + Q + +G+ K+ G++ITG + P + +K++VTS DS +R+ ++ K + + SQ+ A+F+ D ++VS SED +YIW+ Sbjct: 661 YFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKV-GRKITGIEPLPGE-NKILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFNYLVSGSEDKYVYIWS 813
BLAST of CX294778 vs. ExPASy Swiss-Prot
Match: WDR44_RAT (WD repeat-containing protein 44 OS=Rattus norvegicus GN=Wdr44 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.083e-19 Identity = 51/155 (32.90%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 6 YFISGSIDGKVRIWEVRRCQVVDYTDI---REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQKQI-CLQGKKKLPGKRITGFQFSPSDPSKVIVTSADSLVRVLCGENVVGKFKASAFRVAGSQMFATFTSDGKHVVSPSEDSNIYIWN 458 YF+SGS+DGK+R+W + +V + ++ ++++A +C +GK ++GT G C FYD + + + Q + +G+ K+ G++ITG + P + +K++VTS DS +R+ ++ K + + SQ+ A+F+ D ++VS SED +YIW+ Sbjct: 657 YFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKV-GRKITGIEPLPGE-NKILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWS 809
BLAST of CX294778 vs. ExPASy Swiss-Prot
Match: WDR44_MOUSE (WD repeat-containing protein 44 OS=Mus musculus GN=Wdr44 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.083e-19 Identity = 51/155 (32.90%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 6 YFISGSIDGKVRIWEVRRCQVVDYTDI---REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQKQI-CLQGKKKLPGKRITGFQFSPSDPSKVIVTSADSLVRVLCGENVVGKFKASAFRVAGSQMFATFTSDGKHVVSPSEDSNIYIWN 458 YF+SGS+DGK+R+W + +V + ++ ++++A +C +GK ++GT G C FYD + + + Q + +G+ K+ G++ITG + P + +K++VTS DS +R+ ++ K + + SQ+ A+F+ D ++VS SED +YIW+ Sbjct: 664 YFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKV-GRKITGIEPLPGE-NKILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWS 816
BLAST of CX294778 vs. ExPASy Swiss-Prot
Match: WDR44_HUMAN (WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.083e-19 Identity = 51/155 (32.90%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 6 YFISGSIDGKVRIWEVRRCQVVDYTDI---REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQKQI-CLQGKKKLPGKRITGFQFSPSDPSKVIVTSADSLVRVLCGENVVGKFKASAFRVAGSQMFATFTSDGKHVVSPSEDSNIYIWN 458 YF+SGS+DGK+R+W + +V + ++ ++++A +C +GK ++GT G C FYD + + + Q + +G+ K+ G++ITG + P + +K++VTS DS +R+ ++ K + + SQ+ A+F+ D ++VS SED +YIW+ Sbjct: 662 YFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKV-GRKITGIEPLPGE-NKILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWS 814
BLAST of CX294778 vs. ExPASy Swiss-Prot
Match: WDR44_XENLA (WD repeat-containing protein 44 OS=Xenopus laevis GN=wdr44 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.553e-19 Identity = 50/154 (32.47%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 6 YFISGSIDGKVRIWEVRRCQVVDYTDI---REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQKQICLQGKKKLPGKRITGFQFSPSDPSKVIVTSADSLVRVLCGENVVGKFKASAFRVAGSQMFATFTSDGKHVVSPSEDSNIYIWN 458 YF+SGS+DGK+R+W + +V + +I ++++A +C +GK ++GT G C FYD + + + Q + + G++ITG + P + +K++VTS DS +R+ ++ K + SQ+ A+F+ D ++VS SED +YIW+ Sbjct: 665 YFLSGSLDGKLRLWNIPDKKVALWNEIDGQTKLITAANFCQNGKHAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNRVGRKITGIEPLPGE-NKILVTSNDSRIRLYDLRDLSLSMKYKGCVNSSSQIKASFSHDFTYIVSGSEDKYVYIWS 817
BLAST of CX294778 vs. ExPASy Swiss-Prot
Match: YF48_SCHPO (Uncharacterized WD repeat-containing protein C3H5.08c OS=Schizosaccharomyces pombe GN=SPAC3H5.08c PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.929e-18 Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 6 YFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQKQICLQGKKKLPGKRITGFQF------SPSDPSKVIVTSADSLVRV--LCGENVVGKFKASAFRVAGSQMFATFTSDGKHVVSPSEDSNIYIWN 458 +F+SGS+D K+R+W ++ V + ++ E+++AV + PDG I GT G C FYD + + Q I K G ++TG Q + + ++++VT+ DS +R+ L +++ KFK A A SQ A F DG +V+ SED ++IW+ Sbjct: 364 FFLSGSLDCKLRLWSIKEKAVSFWNELPELITAVAFSPDGGLAIAGTFVGLCLFYDTRGLRFRTQMSIRSSRGKNAKGSKVTGIQTRTQMIDNIAGDTEMLVTTNDSRIRIYNLRDKSLELKFKGHA--NAQSQNRAYFDDDGNYVICGSEDHQVFIWD 520
BLAST of CX294778 vs. ExPASy Swiss-Prot
Match: YNS5_SCHPO (Uncharacterized WD repeat-containing protein C18H10.05 OS=Schizosaccharomyces pombe GN=SPBC18H10.05 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.495e-14 Identity = 40/157 (25.48%), Postives = 82/157 (52.23%), Query Frame = 3 Query: 6 YFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQKQICLQGKKKLPGKRITGFQFS---PSDPSK---VIVTSADSLVRVLCGENVVGKFKASAFRVAGSQMFATFTSDGKHVVSPSEDSNIYIWN 458 YF+SGS+D K+++W + R +++ +T++ +VS +C+ PDG+ +VG G C Y+ K+ Q Y + + R+TG Q + P+D V+V++ D+ +R+ K S ++ + + D +++S S+ + + +W+ Sbjct: 310 YFVSGSLDCKIQLWSILRHKILHWTELEYVVSTICFYPDGESIVVGMFYGLCAIYETKNLQ-YVSSWLIHHSPSRNKKCRVTGLQCASIIPNDSKSDNVVLVSTNDNAIRLYNTVTHALVLKLSDAHRVNGRVLSRLSEDNSYIISGSDTNEVVLWH 465 The following BLAST results are available for this feature:
BLAST of CX294778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294778 ID=CX294778; Name=CX294778; organism=Citrus clementina; type=EST; length=525bpback to top |