CX294787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_DANRE (Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.004e-21 Identity = 68/210 (32.38%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY---------GQLNSPQ-LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S P D+ + +T ++ T ES AA+W++P + N+PQ LE + LD AH G + CVLW G +++S+ E ++ LW L S+ A + S + G L + + G W P H+ +A +++++ WDLRS Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLKFDNQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYNKTSESRVLTCAAVWRMPPEWESGNHESPDDSSNNPQTLELLCHLDNSAH-GSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKF-TAGKWSPHHNCTQLATANDTAIRGWDLRS 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_DICDI (Protein tssc1 homolog OS=Dictyostelium discoideum GN=tssc1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.236e-21 Identity = 64/213 (30.05%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFST----------------------GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS-LDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 591 YGL + R +S + A+ D FL GT +L+EENE+ LL + G + C +F HP EI ++SCPFD +F +V++T + +++W+I E + +E + L H G I +L SG ++ ++S+D+ NI LWS +D N+ + + G L LS G+ +P+ N +A + +++ WD R+ Sbjct: 14 YGLSQKTRALSHITAEADVNRFLVGTTALREENEIALLE-AKEGEGVRCLSIFPHPKEIHSITSCPFDSSLFFSVYNTSGGGNNNSNNTNNNDNTNNNTNNNDFKSSLWRINE-----SMDSIEELFELKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWSKIDDQNEPTVI---KQFGNLSKLSVGSINPNISNQLATANDVNIKGWDFRN 217
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_XENTR (Protein TSSC1 OS=Xenopus tropicalis GN=tssc1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.506e-21 Identity = 66/210 (31.43%), Postives = 107/210 (50.95%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG----AAIWQIP-ELYG---------QLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW +S+ P D+ + +T ++ AA+W+IP EL G N+ LE + LD AH G + CV W G KL+S+ + + +W L S+ + + S + G L + S G W P H+ VA +++++ WD+RS Sbjct: 9 YGLEFQARALAAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNILLHHAGEIWQISASPADRNVLATCYNKISDSKVLTCAAVWRIPKELQGGNHESPDDTSSNAQALELLCHLDNTAH-GNMACVTWEPLGDGKKLLSLADNYLMIWDLQESSTKSVLSSSVTLEGKGQLRFTS-GKWSPHHNCTQVATANDTAIRGWDIRS 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_RAT (Protein TSSC1 OS=Rattus norvegicus GN=Tssc1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21 Identity = 66/209 (31.58%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD-AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP+ LE + LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + S G W P H+ VA +++++ WD RS Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTSDSRVQACAAVWRMPKELESGSHESPEDPASTAQTLELLCHLDNGAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSAALEGRGQLKFTS-GRWSPHHNCTQVATASDTTLRGWDTRS 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_XENLA (Protein TSSC1 OS=Xenopus laevis GN=tssc1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20 Identity = 65/210 (30.95%), Postives = 107/210 (50.95%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS----TGESYGAAIWQIP-ELYG---------QLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW + + P D+ + +T ++ + AA+W+IP EL G N+ LE + LD AH G + CV W G KL+S+ + + +W L S+ + + S + G L + S G W P H+ VA +++++ WD+RS Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNVLLHHAGEIWQIGASPADRNVLATCYNKISDSKVMTCAAVWRIPKELQGGNHESPDDTSSNAQSLELLCHLDSTAH-GNMACVTWEPLGDGKKLLSLADNYLLIWDLQESSTKSVLSSSATLEGKGQLRFTS-GKWSPHHNCTQVATANDTAIRGWDIRS 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_HUMAN (Protein TSSC1 OS=Homo sapiens GN=TSSC1 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20 Identity = 69/210 (32.86%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD RS Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLTTCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTRS 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_MOUSE (Protein TSSC1 OS=Mus musculus GN=Tssc1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.229e-20 Identity = 65/209 (31.10%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD-AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD + G + CV+W G K++S+ + +I LW L S+ A + S + G L + + G W P H+ VA +++++ WD RS Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTTDSRVQACAAVWRMPKELESGSHESPDDPASTAQTLELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKF-TAGRWSPHHNCTQVATASDTTLRGWDTRS 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_GECJA (Protein TSSC1 OS=Gecko japonicus GN=TSSC1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.395e-20 Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY----------GQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T +S T +S AA+W++P+ N+ LE + LD AH G + VLW G KL+S+ + ++ LW L S+ A + + + G L + S G W P H+ VA +++++ WD+R+ Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADKGVLATCYSKTSDSKVMTCAAVWRMPKELESGSHESPDDSSSNAQTLELLCHLDNTAH-GNMAGVLWEPMGDGKKLISLADNHLLLWDLQESSSKAVLSNSAALEGKGQLKFTS-GRWSPHHNCTQVATANDTAIRGWDIRT 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_MACFA (Protein TSSC1 OS=Macaca fascicularis GN=TSSC1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19 Identity = 67/210 (31.90%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD R+ Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLATCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-SNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTRT 216
BLAST of CX294787 vs. ExPASy Swiss-Prot
Match: TSSC1_PONAB (Protein TSSC1 OS=Pongo abelii GN=TSSC1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.947e-18 Identity = 69/237 (29.11%), Postives = 111/237 (46.84%), Query Frame = 1 Query: 22 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-------TGESYG------------------------AAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRS 591 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ + +S+G AA+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD RS Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADRGVLATCYNRTFCCVLSLDSFGALGKSSAQLFIALATSSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTRS 243 The following BLAST results are available for this feature:
BLAST of CX294787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294787 ID=CX294787; Name=CX294787; organism=Citrus clementina; type=EST; length=591bpback to top |