CX294870

Overview
NameCX294870
Unique NameCX294870
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX294870 vs. ExPASy Swiss-Prot
Match: FBL3_ARATH (F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 7.527e-32
Identity = 69/140 (49.29%), Postives = 89/140 (63.57%), Query Frame = 2 
Query:   62 MKKQRCSEKINLFDLLSEEIVFIILDCLNTNPFDKKSFSLVCKSFYITESKHRKKLKPLRQEHLPAVLIRYSNTTHLDLSLCPRINDHSLFAISKITSFTLQSIDXXXXXXXXXXXXXXXXXXCKNLKEIDISNAVSLKD 481
            MKK +    +  FDLLSEE+VFIILD ++ NP D KSFSL CKSFY  ESKHR  LKPLR ++LP +L RY NTT LDL+ CPR+ D++L  +  ++  TL+S+D                  C NL EID+SNA  ++D
Sbjct:    1 MKKVKQIRVLKPFDLLSEELVFIILDLISPNPSDLKSFSLTCKSFYQLESKHRGSLKPLRSDYLPRILTRYRNTTDLDLTFCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVEIDLSNATEMRD 140
The following BLAST results are available for this feature:
BLAST of CX294870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL3_ARATH7.527e-3249.29F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionC05056H07SK PhIFruit1 Citrus clementina cDNA clone C05056H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294870 ID=CX294870; Name=CX294870; organism=Citrus clementina; type=EST; length=510bp
AAAAAAAATTGTAACATTTCCTTTGATAATCTTGTCAAATTTTCAATTTT
TTTTTTCAATCATGAAGAAGCAAAGGTGCTCCGAAAAGATCAATCTTTTC
GATCTTCTATCAGAAGAGATCGTTTTTATAATATTGGATTGCCTTAATAC
GAACCCTTTTGACAAAAAATCATTTTCTTTGGTTTGCAAATCGTTTTACA
TTACAGAATCAAAGCACCGCAAGAAACTGAAGCCTCTTCGCCAAGAGCAC
TTACCAGCTGTTCTCATTCGATATTCAAACACAACCCATCTTGATCTCAG
TCTCTGTCCACGCATAAATGACCATTCTTTATTTGCAATATCGAAAATCA
CTAGCTTTACACTTCAATCTATTGATCTTTCACGTTCTTGGGGCTTTTCA
AGTTCTGGGTTGCTGAGTTTGACGTTGAGCTGTAAGAATTTGAAGGAGAT
TGATATTTCAAACGCCGTGAGTTTAAAGGATGCTGGGGCTGCGGCTTTGG
CTGAGGCAAA
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