CX294927

Overview
NameCX294927
Unique NameCX294927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length634
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig597 contig Ccv1_Contig597:1..635. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.340e-16
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 3 
Query:  396 KMLGYETVR----SKDDGKFEVDLEGGDGER-LYPGLSYGENQLRWGFIRKVYGILTAQIVLTTLVSSITVLYNP 605
            K  GY +V      +  GK ++DLE G GE  LYPGLSYGENQLRWGFIRKVYGIL+AQ++LTTL+S++ VL  P
Sbjct:    3 KPYGYASVSMSGIDRSAGK-DIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPP 76
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_MAIZE (Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CX294927 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 103
            KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:  116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
The following BLAST results are available for this feature:
BLAST of CX294927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BI1L_ARATH9.340e-1661.33BI1-like protein OS=Arabidopsis thaliana GN=At4g15... [more]
CALM_WHEAT6.329e-12100.00Calmodulin OS=Triticum aestivum PE=1 SV=3[more]
CALM_SPIOL6.329e-12100.00Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_MEDSA6.329e-12100.00Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_MALDO6.329e-12100.00Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM_MAIZE6.329e-12100.00Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2[more]
CALM_LILLO6.329e-12100.00Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_HORVU6.329e-12100.00Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_HELAN6.329e-12100.00Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_EUPCH6.329e-12100.00Calmodulin OS=Euphorbia characias PE=2 SV=4[more]

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Properties
Property NameValue
Genbank descriptionC05057F06SK PhIFruit1 Citrus clementina cDNA clone C05057F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294927 ID=CX294927; Name=CX294927; organism=Citrus clementina; type=EST; length=634bp
GAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTTG
ATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCC
AAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACTAAATTA
TAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTCATG
AGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGATG
GTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGACTCGCAAA
ACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTTCTATGAATGTTGT
TGTCTGTTTAATGTGTTCGAAAATTCAAAAATCAAAATCGCTTGAAAGAT
GTTGGGCTACGAGACGGTGAGGAGCAAAGATGACGGCAAATTCGAGGTAG
ATCTGGAAGGCGGAGATGGGGAGAGGCTTTACCCCGGTCTCAGCTACGGC
GAGAACCAGCTCCGATGGGGTTTCATTCGCAAGGTGTACGGCATCTTGAC
GGCCCAGATCGTTTTGACCACCTTGGTCTCCTCAATCACCGTTCTTTACA
ATCCATCAACGATCTTCTCAGGGGCAATTCTGGC
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