CX294936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: GMS1_SCHPO (UDP-galactose transporter OS=Schizosaccharomyces pombe GN=gms1 PE=2 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 2.040e-15 Identity = 35/119 (29.41%), Postives = 65/119 (54.62%), Query Frame = 3 Query: 204 MFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP-----PGMLVDIPSTAKAA 545 +F +L+ D+ E G F GYN W+ + G++V+ + +ADNI+K +STS++++++ + SVYL +FK +L +G+++ + + +Y P P IP T + A Sbjct: 231 LFTILMKDYHNIAENG-----FFFGYNSIVWLAILLQAGGGIIVALCVAFADNIMKNFSTSISIIISSLASVYLMDFKISLTFLIGVMLVIAATFLYTKPESKPSPSRGTYIPMTTQDA 344 HSP 2 Score: 36.965 bits (84), Expect = 2.040e-15 Identity = 17/40 (42.50%), Postives = 27/40 (67.50%), Query Frame = 2 Query: 56 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQL 175 P+ G+ +++ +S LAGVY E ++K N SL+ +NVQL Sbjct: 183 PVTGFSAVLVACLISGLAGVYFEKVLKDTNPSLWVRNVQL 222
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A3_CANFA (UDP-N-acetylglucosamine transporter OS=Canis familiaris GN=SLC35A3 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 3.646e-14 Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 186 FGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 506 FG+IF + + + D + G F GYN TW+VV GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT FLG I+ + + +Y P Sbjct: 215 FGSIFGLMGVYIYDGELVSKNG-----FFQGYNRLTWIVVILQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGYDP 317 HSP 2 Score: 33.4982 bits (75), Expect = 3.646e-14 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L+ VL+AC S+ AGVY E ++K+ S++ +N+QL Sbjct: 177 LMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQL 212
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A3_MOUSE (UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35a3 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.737e-14 Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 186 FGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 506 FG+IF + + + D + G F GYN TW+VV GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT FLG I+ + + +Y P Sbjct: 215 FGSIFGLMGVYVYDGELVSKNG-----FFQGYNQLTWIVVALQALGGLVIAAVIKYADNILKGFATSLSIILSTIISYFWLQDFVPTSVFFLGAILVIAATFLYGYDP 317 HSP 2 Score: 33.4982 bits (75), Expect = 4.737e-14 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L+ VL+AC S+ AGVY E ++K+ S++ +N+QL Sbjct: 177 LMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQL 212
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A3_HUMAN (UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35A3 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.737e-14 Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 186 FGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 506 FG+IF + + + D + G F GYN TW+VV GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT FLG I+ + + +Y P Sbjct: 214 FGSIFGLMGVYIYDGELVSKNG-----FFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGYDP 316 HSP 2 Score: 33.4982 bits (75), Expect = 4.737e-14 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L+ VL+AC S+ AGVY E ++K+ S++ +N+QL Sbjct: 176 LMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQL 211
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A3_BOVIN (UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 6.155e-14 Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 186 FGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 506 FG+IF + + + D + G F GYN TW+VV GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT FLG I+ + + +Y P Sbjct: 215 FGSIFGLMGVYVYDGELVSKNG-----FFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGYDP 317 HSP 2 Score: 33.4982 bits (75), Expect = 6.155e-14 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L+ VL+AC S+ AGVY E ++K+ S++ +N+QL Sbjct: 177 LMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQL 212
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A2_MOUSE (UDP-galactose translocator OS=Mus musculus GN=Slc35a2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.954e-14 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 249 GPWW--------QRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAP 548 G WW Q F GY W VV N GLLV+ ++KYADNI+K ++TS++++L+ V S+ LF F LG + + ++++Y P G + I S + + P Sbjct: 249 GLWWAEGTAVASQGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHLDPLFALGAGLVIGAVYLYSLPRGAVKAIASASASGP 356 HSP 2 Score: 30.4166 bits (67), Expect = 7.954e-14 Identity = 15/36 (41.67%), Postives = 27/36 (75.00%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L V+++CLS+ AGVY E ++K ++ S++ +N+QL Sbjct: 203 LAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQL 238
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A3_RAT (UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 7.996e-14 Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 186 FGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 506 FG+IF + + + D + G F GYN TW+VV GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT FLG I+ + + +Y P Sbjct: 215 FGSIFGLMGVYVYDGELVSKNG-----FFQGYNQLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTIISYFWLQDFVPTSVFFLGAILVIAATFLYGYDP 317 HSP 2 Score: 32.3426 bits (72), Expect = 7.996e-14 Identity = 16/36 (44.44%), Postives = 25/36 (69.44%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L+ VL AC S+ AGVY E ++K+ S++ +N+QL Sbjct: 177 LMAVLIACFSSGFAGVYFEKILKETKQSVWIRNIQL 212
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: SRF3_CAEEL (UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=4) HSP 1 Score: 63.5438 bits (153), Expect = 1.038e-13 Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 267 LFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLV-------DIPSTAKA 542 L G++ W+ V G GL V+ +KYADNI K ++TS+A++L+ + S++LF+F P+ LG + + S+ +Y + M+ +IPST +A Sbjct: 227 LLYGFDSIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSFTFLLGASLVIFSIFLYSSHQSMVAALGRLRGEIPSTKEA 325 HSP 2 Score: 33.4982 bits (75), Expect = 1.038e-13 Identity = 16/42 (38.10%), Postives = 28/42 (66.67%), Query Frame = 2 Query: 53 APIQGYLLGVLSACLSALAGVYTEFLMKKNND-SLYWQNVQL 175 +P G++ V++ CLS AG+Y E ++K + SL+ +NVQ+ Sbjct: 161 SPFVGFVAVVVACCLSGFAGIYFEKILKGSAPVSLWMRNVQM 202
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A2_CANFA (UDP-galactose translocator OS=Canis familiaris GN=SLC35A2 PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 1.341e-13 Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 249 GPWWQR--------LFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDS 554 G WW F GY W VV N GLLV+ ++KYADNI+K ++TS++++L+ V S+ LF F LG + + ++++Y P G I ST+ +A S Sbjct: 249 GLWWAEGTAVARRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPRGTAKAIASTSASASAS 358 HSP 2 Score: 30.4166 bits (67), Expect = 1.341e-13 Identity = 15/36 (41.67%), Postives = 27/36 (75.00%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L V+++CLS+ AGVY E ++K ++ S++ +N+QL Sbjct: 203 LAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQL 238
BLAST of CX294936 vs. ExPASy Swiss-Prot
Match: S35A2_HUMAN (UDP-galactose translocator OS=Homo sapiens GN=SLC35A2 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 6.443e-13 Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 3 Query: 249 GPWWQR--------LFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAA 545 G WW F GY W VV N GLLV+ ++KYADNI+K ++TS++++L+ V S+ LF F LG + + ++++Y P G I S + +A Sbjct: 249 GLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPRGAAKAIASASASA 355 HSP 2 Score: 30.4166 bits (67), Expect = 6.443e-13 Identity = 15/36 (41.67%), Postives = 27/36 (75.00%), Query Frame = 2 Query: 71 LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 175 L V+++CLS+ AGVY E ++K ++ S++ +N+QL Sbjct: 203 LAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQL 238 The following BLAST results are available for this feature:
BLAST of CX294936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294936 ID=CX294936; Name=CX294936; organism=Citrus clementina; type=EST; length=607bpback to top |