CX294952

Overview
NameCX294952
Unique NameCX294952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1257 contig Ccv1_Contig1257:18..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.232e-61
Identity = 125/197 (63.45%), Postives = 141/197 (71.57%), Query Frame = 1
Query:  130 EALNPLFSSVSSAFPPNPSLRFSSPKNDNGV-VVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            E L+P+ S+ S  F     L+  S K+ NG+ VVCASK +N  PLTGV+F PFEEVKKEL LVPTVPQ+SLARHK++D CEAA+NEQINVEYNVSYVYH M+AYFDRDNVALKGL                KLMEYQNKRGGKVKLQSILMPLSEFDHAE+GDALYAME                H VA +N+DVQL
Sbjct:   17 ENLSPMLSTSSQGFV----LKNFSTKSRNGLLVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQL 209          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.508e-60
Identity = 125/192 (65.10%), Postives = 135/192 (70.31%), Query Frame = 1
Query:  142 PLFSSVSSAFPPNPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            PL +S SS       +R+S     N +V CA+K+ NN PLTGV+F PFEEVKKELDLVPTVPQ SLAR K+TDDCEA INEQINVEYNVSYVYHAMFAYFDRDNVALKGL                KLMEYQNKRGGKVKLQSI+MPLSEFDH EKGDALYAME                H VA KN+DVQL
Sbjct:   21 PLPNSSSSGI-----IRYSQSLGKN-LVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQL 206          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 6.408e-54
Identity = 117/190 (61.58%), Postives = 131/190 (68.95%), Query Frame = 1
Query:  151 SSVSSAFPPNPSLRFSSPKNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            +S  S F PN     S P    G+VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ E+A+NEQINVEYNVSYVYHAMFAYFDRDNVAL+GL                KLMEYQNKRGGKVKLQSI+MPLS+FDHA+KGDAL+AME                H VA KN DVQL
Sbjct:   10 ASSLSLFSPNAEPPRSVPAR--GLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQL 197          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.408e-54
Identity = 116/198 (58.59%), Postives = 128/198 (64.65%), Query Frame = 1
Query:  124 QKEALNPLFSSVSSAFPPNPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            Q E L+PLFSS  S           SPKN N  VV ASK  N+ PLTGV+F PFEE+KKEL LVP VP  SL R K++DDCEAAINEQINVEYN SYVYHAMFAYFDRDNVALKGL                KLME+QNKRGG+VKL SI  P +EFDH EKGDALYAME                H VA +++DV L
Sbjct:   15 QGENLSPLFSSSKSF----------SPKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHL 202          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.428e-53
Identity = 117/193 (60.62%), Postives = 132/193 (68.39%), Query Frame = 1
Query:  151 SSVSSAFPPNPSLRFSSP---KNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            +S  S F PN     S P    N + +VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ EAA+NEQINVEYNVSYVYHA+FAYFDRDNVAL+GL                KLMEYQN+RGGKVKLQSI+MPLSEFDHA+KGDAL+AME                H VA KN DVQL
Sbjct:    8 ASSLSLFNPNAEPSRSVPVLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQL 200          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.425e-53
Identity = 113/198 (57.07%), Postives = 134/198 (67.68%), Query Frame = 1
Query:  127 KEALNPLFSSVSSAFPPNPSLRFSSPKNDNGVVVC-ASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            K+ ++PL  S+SS      +LR SS K+ N      ASK++    L+GV+F PF+EVKKELDLVPT   LSLAR K++D+CEAAINEQINVEYNVSYVYHAM+AYFDRDN+ALKGL                KLMEYQNKRGG+VKLQSI+MPLSEF+H +KGDALY ME                H VA KN+DV L
Sbjct:   23 KKDVSPLLPSISS------NLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHL 214          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.131e-50
Identity = 112/201 (55.72%), Postives = 134/201 (66.67%), Query Frame = 1
Query:  124 QKEALNPLFSSVSSAFPPNPSLRFSSPKNDN-GVVVCASKNANN--SPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            +K+ ++PLFSS SS   P      SS K+ N    + ASK++    S L+GV+F PFEEVKKE+DLVP+  QLSLARH ++ +CEAA+NEQINVEYNVSYVYHA++AYFDRDNVALKGL                 LMEYQNKRGG+VKLQ +++P SEFDH EKGDALYAME                H VA KN DVQL
Sbjct:   17 EKKDISPLFSSSSSISSP-----VSSGKSGNLSFPLRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQL 212          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.332e-50
Identity = 108/201 (53.73%), Postives = 126/201 (62.69%), Query Frame = 1
Query:  121 PQKEALNPLFSSVSSAFPP--NPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            P    L+  ++   + FPP  N S    SP       V A+K  N   LTGV+F PFEEVKKE++LVPT P +SLARHKF+DD E+AIN+QINVEYNVSYVYHA++AYFDRDNV LKG                   MEYQNKRGG+VKLQSILMP+SEFDH EKGDAL+AME                  V  KN+DVQL
Sbjct:    7 PALSLLSSGYTGGGNLFPPSRNSSNLLFSPSGSR-FSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQL 206          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.909e-47
Identity = 97/184 (52.72%), Postives = 116/184 (63.04%), Query Frame = 1
Query:  175 PNPSLRFSSPK---NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            P P +R ++P+   + +    C +       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAA+NEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + +D QL
Sbjct:   24 PAPVVRVAAPRGVASPSAGAACRAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQL 207          
BLAST of CX294952 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.096e-45
Identity = 95/176 (53.98%), Postives = 112/176 (63.64%), Query Frame = 1
Query:  190 RFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVAHKNHDVQL 717
            R ++ ++   +   A+       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAAINEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + +D QL
Sbjct:   29 RVTAQRSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQL 204          
The following BLAST results are available for this feature:
BLAST of CX294952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
FRI2_TOBAC9.232e-6163.45Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI3_SOYBN3.508e-6065.10Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI4_SOYBN6.408e-5461.58Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI1_TOBAC6.408e-5458.59Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_VIGUN1.428e-5360.62Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_ARATH5.425e-5357.07Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH1.131e-5055.72Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH7.332e-5053.73Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE9.909e-4752.72Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI2_MAIZE1.096e-4553.98Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC05065A03SK DroRLeaf1 Citrus clementina cDNA clone C05065A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294952 ID=CX294952; Name=CX294952; organism=Citrus clementina; type=EST; length=717bp
TTGCGTTTCACTTCATTTGCTCCTCTTTTCAAATCTTTTTGTCCTTGAAA
TCCGTAAACAAAAACATTTGAAAAAAAAAAAATGTTGCTCGAAGCATCTT
CAGCTTTATCCCTCGTGAGCCCCCAAAAGGAGGCTCTAAATCCTCTGTTT
TCCTCTGTTTCTTCAGCCTTTCCGCCGAACCCGAGTCTCCGTTTTTCTTC
ACCGAAAAATGATAACGGCGTGGTGGTTTGCGCCTCTAAAAATGCTAACA
ACAGCCCCTTAACCGGCGTCATTTTTGCTCCCTTTGAAGAGGTGAAAAAG
GAGCTCGATTTGGTCCCAACTGTGCCTCAACTGTCTCTTGCCAGACACAA
GTTCACTGACGATTGTGAGGCCGCAATCAACGAGCAGATCAATGTGGAAT
ACAATGTCTCCTATGTGTATCATGCCATGTTTGCTTACTTTGACAGAGAC
AATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCAAGGAATCAAGTGAAGA
GGAAAGAGAGCATGCTGAGAAATTGATGGAATATCAGAACAAACGAGGAG
GTAAAGTGAAGCTGCAATCAATATTGATGCCTCTCTCTGAGTTTGATCAT
GCTGAGAAAGGAGATGCTTTGTATGCCATGGAGCTTACGCTGTCTCTGGA
GAAGCTAACAAATGAGAAACTCCTCAACTTGCACAAGGTGGCCCACAAGA
ACCATGATGTGCAGTTG
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