CX295035

Overview
NameCX295035
Unique NameCX295035
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig164 contig Ccv1_Contig164:575..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC2_PEA (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pisum sativum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 1.605e-120
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYSLLLKKEKA+I+ PDRVVIANGPAFGCVLM DFLKAL+KRLK N  AYENYHRI+VP+G P K   KEPLRVNV+FQHIQKMLSSETAVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGATLGYAQ+VPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE
Sbjct:  131 DYSSVGYSLLLKKEKAIIVMPDRVVIANGPAFGCVLMNDFLKALAKRLKHNNVAYENYHRIFVPDGTPLKSASKEPLRVNVMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 353
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 3.035e-111
Identity = 184/223 (82.51%), Postives = 206/223 (92.38%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYS LLKK+KA+I+QP+RV++ NGPAFGCV+MK+FL  L+KR+  NTTAYENY RI+VPEGQP + EP EPLRVNVLF+H+QKML+S++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGYAQ   +KRVIACIGDGSFQVTAQDVSTM+RC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV CE
Sbjct:  332 DYSSVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNKNTTAYENYKRIFVPEGQPLESEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCE 554
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 400.979 bits (1029), Expect = 3.035e-111
Identity = 184/223 (82.51%), Postives = 206/223 (92.38%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYS LLKK+KA+I+QP+RV++ NGPAFGCV+MK+FL  L+KR+  NTTAYENY RI+VPEGQP + EP EPLRVNVLF+H+QKML+S++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGYAQ   +KRVIACIGDGSFQVTAQDVSTM+RC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV CE
Sbjct:  332 DYSSVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNKNTTAYENYKRIFVPEGQPLESEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCE 554
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 9.763e-110
Identity = 194/249 (77.91%), Postives = 206/249 (82.73%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGY--------------------------EFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYSLL+KKEK++I+QPDRVVI NGPAFGCVLMKDFL  L+K++K N TAYENY RI+VPEG P K EP EPLRVNVLFQHIQKMLS ETAVIAETGDSWFNCQKLKLP+GCGY                          EFQMQYGSIGWSVGATLGYAQSVP+KRVI+CIGDGSFQVTAQDVSTM+RC QK IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEG CWT KV  E
Sbjct:  314 DYSSVGYSLLIKKEKSIIVQPDRVVIGNGPAFGCVLMKDFLSELAKKIKKNETAYENYRRIFVPEGTPLKSEPNEPLRVNVLFQHIQKMLSDETAVIAETGDSWFNCQKLKLPEGCGYVTNNSLSAWYPFYLQTLEEKSSCCRYEFQMQYGSIGWSVGATLGYAQSVPKKRVISCIGDGSFQVTAQDVSTMIRCEQKNIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGNCWTMKVRTE 562
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.138e-108
Identity = 178/223 (79.82%), Postives = 205/223 (91.93%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYSLLLK+EKAVI+QPDRVV+ NGPAFGC+LM +FL AL+KRL  NTTAY+NY RI++P+ +PP  +P EPLRVN+LF+HI++MLS +TAVIAETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVI+CIGDGSFQ+TAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL+DAIHN +G CWT KV  E
Sbjct:  331 DYSSVGYSLLLKREKAVIVQPDRVVVGNGPAFGCILMTEFLDALAKRLDRNTTAYDNYRRIFIPDREPPNGQPDEPLRVNILFKHIKEMLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTE 553
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.138e-108
Identity = 178/223 (79.82%), Postives = 205/223 (91.93%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYSLLLK+EKAVI+QPDRVV+ NGPAFGC+LM +FL AL+KRL  NTTAY+NY RI++P+ +PP  +P EPLRVN+LF+HI++MLS +TAVIAETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVI+CIGDGSFQ+TAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL+DAIHN +G CWT KV  E
Sbjct:  331 DYSSVGYSLLLKREKAVIVQPDRVVVGNGPAFGCILMTEFLDALAKRLDRNTTAYDNYRRIFIPDREPPNGQPDEPLRVNILFKHIKEMLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTE 553
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.036e-107
Identity = 179/223 (80.27%), Postives = 206/223 (92.38%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYSLLLK+EKAVI+QPDR+V+ +GPAFGC+LM +FL+AL+KRL+ NTTAY+NY RI+VP+ +PP  +P EPLRVNVLF+HI+ MLS ++AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGATLGYAQ+  +KRVIACIGDGSFQVTAQDVSTMLRCGQK+IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+AIHN EG CWT KV  E
Sbjct:  336 DYSSVGYSLLLKREKAVIVQPDRMVVGDGPAFGCILMPEFLRALAKRLRRNTTAYDNYRRIFVPDREPPNGKPNEPLRVNVLFKHIKGMLSGDSAVVAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNSEGNCWTMKVRTE 558
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.593e-104
Identity = 176/225 (78.22%), Postives = 203/225 (90.22%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSET--AVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYS LLKKEKAV++QPDRV + NGPAFGCV+M+DFL  L+KR++ NTTA++NY RI+VPEGQ P+CE  E LRVNVLF+HIQ+M+      AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGA LGYAQ+V +KRV+ACIGDGSFQVTAQDVSTMLRCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+Y GLV+AIHNGEG+CW T+V CE
Sbjct:  312 DYSSVGYSCLLKKEKAVVVQPDRVTVGNGPAFGCVMMRDFLSELAKRVRKNTTAFDNYKRIFVPEGQLPECEAGEALRVNVLFKHIQRMIGGTEIGAVMAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGALLGYAQAV-QKRVVACIGDGSFQVTAQDVSTMLRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYVGLVNAIHNGEGRCWATRVRCE 535
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 377.481 bits (968), Expect = 3.593e-104
Identity = 176/225 (78.22%), Postives = 203/225 (90.22%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSET--AVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYS LLKKEKAV++QPDRV + NGPAFGCV+M+DFL  L+KR++ NTTA++NY RI+VPEGQ P+CE  E LRVNVLF+HIQ+M+      AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGA LGYAQ+V +KRV+ACIGDGSFQVTAQDVSTMLRCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+Y GLV+AIHNGEG+CW T+V CE
Sbjct:  312 DYSSVGYSCLLKKEKAVVVQPDRVTVGNGPAFGCVMMRDFLSELAKRVRKNTTAFDNYKRIFVPEGQLPECEAGEALRVNVLFKHIQRMIGGAEIGAVMAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGALLGYAQAV-QKRVVACIGDGSFQVTAQDVSTMLRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYVGLVNAIHNGEGRCWATRVRCE 535
[Close]
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.180e-101
Identity = 173/223 (77.58%), Postives = 197/223 (88.34%), Query Frame = 2 
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            DYSSVGYSLL+KKEK++I+QP+RV I NG + G V M DFL AL+K++K+NTTA ENY RIYVP G P K E  EPLRVNVLF+HIQ ++S +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQ+  +KRVIACIGDGSFQVTAQD+STM+RCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+YTG V AIHNG+GKCWT KV  E
Sbjct:  319 DYSSVGYSLLIKKEKSLIVQPNRVTIGNGLSLGWVFMADFLTALAKKVKTNTTAVENYRRIYVPPGIPLKREKDEPLRVNVLFKHIQALISGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAATDKRVIACIGDGSFQVTAQDISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGFVSAIHNGQGKCWTAKVRTE 541
The following BLAST results are available for this feature:
BLAST of CX295035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC2_PEA1.605e-12091.93Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pis... [more]
PDC2_ORYSJ3.035e-11182.51Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_ORYSI3.035e-11182.51Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_TOBAC9.763e-11077.91Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC1_ORYSJ9.138e-10879.82Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_ORYSI9.138e-10879.82Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_MAIZE2.036e-10780.27Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]
PDC3_ORYSJ3.593e-10478.22Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC3_ORYSI3.593e-10478.22Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC1_PEA2.180e-10177.58Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]

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Properties
Property NameValue
Genbank descriptionC05065H06SK DroRLeaf1 Citrus clementina cDNA clone C05065H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295035 ID=CX295035; Name=CX295035; organism=Citrus clementina; type=EST; length=679bp
GAGGATTTATGACTATAGCTCGGTTGGGTACTCTCTTCTTCTCAAGAAGG
AGAAGGCAGTCATTCTGCAGCCTGATCGTGTGGTGATTGCTAATGGACCG
GCATTTGGTTGTGTTTTGATGAAGGATTTCCTCAAAGCACTTTCAAAGCG
GCTCAAAAGCAACACTACTGCTTATGAGAATTACCACAGGATTTATGTTC
CTGAGGGGCAACCTCCGAAGTGTGAACCCAAAGAGCCCTTGAGAGTGAAT
GTTCTGTTCCAACATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGAT
TGCTGAGACAGGGGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTA
AGGGATGCGGGTATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCT
GTTGGTGCTACTCTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCAT
TGCTTGCATAGGTGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAA
CAATGCTGCGATGTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGT
GGTTACACCATTGAAGTTGAGATCCATGATGGACCGTACAATGTGATCAA
GAACTGGAACTACACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCA
AGTGCTGGACAACCAAGGTCTTCTGCGAG
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