CX295062

Overview
NameCX295062
Unique NameCX295062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4627 contig Ccv1_Contig4627:323..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.197e-44
Identity = 94/175 (53.71%), Postives = 117/175 (66.86%), Query Frame = 1
Query:  205 SDESNPMIPEQHEET------KRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMD-TVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            SDE +P    Q E+        R++ +   VP +GV S+CG+RPEMED+V+ IP FLQ+ +  L+D  VT+ F   +  HFFGVYDGHGG QVANYC ERMHLAL EE+V  K    DG +WQE+WKKA  NSF++VDSEI         APET GST+VVA++ PT I VANCG
Sbjct:   80 SDEFDPRSMNQSEKKVLSRTESRSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAH----APETVGSTSVVAVVFPTHIFVANCG 250          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43
Identity = 88/152 (57.89%), Postives = 107/152 (70.39%), Query Frame = 1
Query:  253 RAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            R++ +   VP +G  S+CG+RPEMEDAV+ IP FLQ  +  ++D    +F  Q   HFFGVYDGHGG QVANYC ERMHLALAEE+   K  L DG +W E+WKKA  NSFL+VDSEI      E VAPET GST+VVA++ P+ I VANCG
Sbjct:  118 RSLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLD---GRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI------ESVAPETVGSTSVVAVVFPSHIFVANCG 260          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35
Identity = 94/244 (38.52%), Postives = 132/244 (54.10%), Query Frame = 1
Query:   46 DKKSKMVNPDSKEEDS------MSLVDSSGPDEFLTA-VNRRSVADDVELEIFAERGKKESDESNPMIPEQHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD--QVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAK---ARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGG-----------EPVAPETAGSTAVVAIISPTLIIVANCG 708
            D +S++  PD+ E D+        +++ +  ++  TA V   S+  DV +E+          E NP +        R+V +L+ +P WG  S+CG R EMEDAV  +P FL+I   +LM       P    +  HFFGVYDGHGG QVA+YC +R+H ALAEE+   K    R   G   Q QW+K F + +LKVD E+ G +             E V+PET GSTAVVA++  + IIV+NCG
Sbjct:  106 DARSEISLPDTVETDNGRVLATAIILNETTIEQVPTAEVLIASLNHDVNMEVATSEVVIRLPEENPNVARG----SRSVYELECIPLWGTISICGGRSEMEDAVRALPHFLKIPIKMLMGDHEGMSPSLPYLTSHFFGVYDGHGGAQVADYCHDRIHSALAEEIERIKEELCRRNTGEGRQVQWEKVFVDCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPETVGSTAVVALVCSSHIIVSNCG 345          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.598e-35
Identity = 78/161 (48.45%), Postives = 101/161 (62.73%), Query Frame = 1
Query:  253 RAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVT----DQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGG----SWQEQWKKAFANSFLKVDSEIGG-ALGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            R+V  ++ VP WG  S+CG+RPEMEDAV  +  F  I   +L         D    ++  HFFGVYDGHGG QVANYC ER+H AL EEL   +  +         ++++W++AF + F +VD E+GG A  GE VAPET GSTAVVA+I  + IIVANCG
Sbjct:  139 RSVFAVECVPLWGHKSICGRRPEMEDAVVAVSRFFDIPLWMLTGNSVVDGLDPMSFRLPAHFFGVYDGHGGAQVANYCRERLHAALVEELSRIEGSVSGANLGSVEFKKKWEQAFVDCFSRVDEEVGGNASRGEAVAPETVGSTAVVAVICSSHIIVANCG 299          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.267e-34
Identity = 76/164 (46.34%), Postives = 103/164 (62.80%), Query Frame = 1
Query:  247 TKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVT----DQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAK----ARLQDGGSWQEQWKKAFANSFLKVDSEIGG--ALGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            T R+V  +D VP WG+ S+CG+RPEMED  AV+P F  +   ++         D+   ++  HFF VYDGHGG QVANYC +R+H  L EEL  A+         G   ++ W+KAF + F +VD+E+GG  A G  PVAP+T GSTAVVA++  + +IVANCG
Sbjct:  112 TARSVFAMDCVPLWGLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYDGHGGVQVANYCRKRIHAVLTEELRRAEDDACGSDLSGLESKKLWEKAFVDCFSRVDAEVGGNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCG 275          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.982e-31
Identity = 78/167 (46.71%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  253 RAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD--QVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARL---QDGGSWQEQWKKAFANSFLKVDSEIGGALGG----------EPVAPETAGSTAVVAIISPTLIIVANCG 708
            R+V +LD +P WG  S+ G R EMEDA AV P FL++   +LM       P    +  HFFGVYDGHGG +VA+YC +R+H ALAEE+   K  L     G   Q QW K F + FL VD EI G +G           E VA ET GSTAVVA++  + I+V+NCG
Sbjct:  179 RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 345          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26
Identity = 68/171 (39.77%), Postives = 93/171 (54.39%), Query Frame = 1
Query:  250 KRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVL-----MDTV-TDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGG--SWQEQWKKAFANSFLKVDSEI----------GGALGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            KR+V  +D  P WG  S  G+  EMEDA A +P F  +   +L     +D +  D    ++  H FGV+DGHGG +VANYC ER+H+ L+EEL      L + G    +E W   F   F +VD E+          GG +  EPV  E  GSTAVVA++  + ++VANCG
Sbjct:   49 KRSVYLMDCAPVWGCASTRGRSAEMEDASAAVPRFADVPVRLLASRRDLDALGLDADALRLPAHLFGVFDGHGGAEVANYCRERIHVVLSEELKRLGKNLGEMGEVDMKEHWDDVFTKCFQRVDDEVSGRVTRVVNGGGEVRSEPVTAENVGSTAVVALVCSSHVVVANCG 219          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24
Identity = 85/242 (35.12%), Postives = 116/242 (47.93%), Query Frame = 1
Query:   28 SNTAHSDKKSKMVNPDSKEEDSMSLVDSSGPDEFLTAVNRRSVADDVELEIFAERGKKESDESNPMIPEQHEETKRAVIQLDQVPRW------GVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDT--VTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQE-------QWKKAFANSFLKVDSEIGGALGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            S+T+  D  +  V      +  +  V  S     L        A  V  +  A+R +  SD S+    +  E  K A     +V RW      G  SV G+R EMEDA+ V   FL       ++   V ++   +    FF VYDGHGG +VA  C ERMH+ LAEE V  +  LQ GG   +       +WK+A A  F +VD E+GGA   +    +T GSTAVVA++ P  I+VANCG
Sbjct:    3 SDTSRRDHAAMAVREVLAGDRKVGTVSRSARRRRLELRRLGRTASAVAEDDAAKRVRPASDSSS----DSSESAKVAPEPTAEVARWPACVSHGAVSVIGRRREMEDAIFVAAPFLAASKEAAVEGSGVAEEEGKEEDEGFFAVYDGHGGSRVAEACRERMHVVLAEE-VRVRRLLQGGGGGADVEDEDRARWKEAMAACFTRVDGEVGGAEEAD-TGEQTVGSTAVVAVVGPRRIVVANCG 238          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 84/242 (34.71%), Postives = 123/242 (50.83%), Query Frame = 1
Query:   28 SNTAHSDKKSKMVNPDSKEE--DSMSLVDSSGPDEFLTAVNRRSVA-DDVELEIFAERGKKESDESNPMIPEQHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPVAP------------ETAGSTAVVAIISPTLIIVANCG 708
            S T   DK   + N  +K+E  D M+   SS P +  ++    SV+ +D ++ I        SD ++ +       +K+ V + D  PR+GV SVCG+R +MEDAVA+ P+F++ QT             +   H+FGVYDGHG   VA  C ER+H  + EE ++ K         +E+WKK    SF ++D E+     GE V              +  GSTAVV++I+P  IIVANCG
Sbjct:   43 STTEEEDKSEGIYNKRNKQEEYDFMNCASSS-PSQ--SSPEEESVSLEDSDVSI--------SDGNSSVNDVAVIPSKKTVKETDLRPRYGVASVCGRRRDMEDAVALHPSFVRKQTEF----------SRTRWHYFGVYDGHGCSHVAARCKERLHELVQEEALSDK---------KEEWKKMMERSFTRMDKEV--VRWGETVMSANCRCELQTPDCDAVGSTAVVSVITPEKIIVANCG 252          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 63/155 (40.65%), Postives = 87/155 (56.13%), Query Frame = 1
Query:  280 PRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPV------------APETAGSTAVVAIISPTLIIVANCG 708
            PR+GV+SVCG+R EMEDAVA+ P+F              +FP     H+FGVYDGHG   VA  C ER+H  + EEL    + ++D    +E+WK     SF ++D E+     G+ V            A ++ GSTAVV++I+P  I+VANCG
Sbjct:   76 PRYGVSSVCGRRREMEDAVAIHPSF--------SSPKNSEFPQ----HYFGVYDGHGCSHVAARCRERLHKLVQEEL---SSDMED----EEEWKTTMERSFTRMDKEV--VSWGDSVVTANCKCDLQTPACDSVGSTAVVSVITPDKIVVANCG 209          
The following BLAST results are available for this feature:
BLAST of CX295062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
P2C77_ARATH1.197e-4453.71Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C56_ARATH3.850e-4357.89Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C07_ARATH5.040e-3538.52Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C06_ORYSJ8.598e-3548.45Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C53_ORYSJ4.267e-3446.34Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C16_ARATH1.982e-3146.71Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C50_ORYSJ1.470e-2639.77Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C08_ORYSJ1.053e-2435.12Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
P2C03_ARATH1.165e-2334.71Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C24_ARATH2.429e-2140.65Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05068B09SK DroRLeaf1 Citrus clementina cDNA clone C05068B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295062 ID=CX295062; Name=CX295062; organism=Citrus clementina; type=EST; length=708bp
GATTCGGCCGAGGCGGCGAACCTCTTATCAAACACTGCTCATAGTGACAA
GAAGTCAAAAATGGTCAATCCCGACAGTAAGGAAGAAGATTCCATGTCGT
TAGTTGATAGTTCAGGTCCTGATGAGTTTCTGACAGCAGTAAATAGGAGA
AGCGTTGCTGATGATGTTGAGTTGGAGATTTTTGCAGAGAGAGGAAAAAA
GGAGTCTGATGAGTCCAATCCAATGATACCTGAGCAGCATGAGGAGACGA
AGAGAGCTGTGATTCAATTAGATCAAGTGCCCCGTTGGGGAGTCAATTCT
GTTTGTGGTAAGAGACCAGAAATGGAAGATGCTGTAGCCGTTATTCCTGC
GTTTTTGCAAATTCAGACTCACGTGCTGATGGATACTGTCACCGATCAGT
TTCCAGATCAAGTACTTGTTCATTTCTTTGGTGTTTATGACGGACATGGT
GGCTGTCAGGTCGCAAATTATTGTTGTGAACGAATGCACTTGGCTTTGGC
AGAGGAGTTGGTGACTGCAAAAGCACGATTACAAGATGGTGGTAGTTGGC
AGGAGCAGTGGAAGAAAGCCTTTGCCAATAGCTTTCTGAAAGTTGATTCT
GAGATCGGAGGAGCTCTTGGAGGTGAACCTGTTGCCCCGGAAACTGCTGG
TTCAACTGCTGTTGTTGCCATTATATCTCCAACACTCATAATAGTAGCAA
ATTGTGGA
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