CX295074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_HUMAN (Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 8.876e-40 Identity = 70/132 (53.03%), Postives = 100/132 (75.76%), Query Frame = 2 Query: 314 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV YV GLQ DGSF+GDIWGE+DTRFS+ A Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCA 149
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_DICDI (Probable geranylgeranyl transferase type-2 subunit beta OS=Dictyostelium discoideum GN=rabggtb PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 76/132 (57.58%), Postives = 95/132 (71.97%), Query Frame = 2 Query: 314 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 L DKHV+YI+ + KKDSFE V EH+R+NG YWGL++L +L LD +D+ +VI W+L CQ +GGF GN HD H+L TLSAVQ+L +D LD +D + V +YV LQ DGSF GD WGEVDTRFSY A Sbjct: 22 LLIDKHVEYIVKLGSKKDSFEYWVTEHIRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDYVVKLQREDGSFVGDQWGEVDTRFSYAA 153
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_BOVIN (Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.754e-39 Identity = 69/132 (52.27%), Postives = 99/132 (75.00%), Query Frame = 2 Query: 314 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV YV LQ DGSF+GDIWGE+DTRFS+ A Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCA 149
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_RAT (Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus GN=Rabggtb PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.186e-38 Identity = 69/132 (52.27%), Postives = 98/132 (74.24%), Query Frame = 2 Query: 314 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV YV LQ DGSF+GDIWGE+DTRFS+ A Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCA 149
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_MOUSE (Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.855e-38 Identity = 69/132 (52.27%), Postives = 97/132 (73.48%), Query Frame = 2 Query: 314 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++ +I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV YV LQ DGSF+GDIWGE+DTRFS+ A Sbjct: 26 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCA 157
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_SCHPO (Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe GN=ptb1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30 Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 2 Query: 305 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSY 703 M L DKH+ Y+ + + D + + EHL ++ YW + +L K D +D+E ++S++L C ESGGFA GHD H+ T+ AVQVLA+ D L ++D DKV++Y+ GLQN DGS GD WGE+D RF Y Sbjct: 1 MAVLLRDKHISYLHDIGNRTDELDFWLKEHLHVSAIYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMKGDRWGEIDARFLY 133
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: GGTB2_CAEEL (Probable geranylgeranyl transferase type-2 subunit beta OS=Caenorhabditis elegans GN=ggtb-1 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.855e-29 Identity = 57/130 (43.85%), Postives = 88/130 (67.69%), Query Frame = 2 Query: 311 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFS 700 EL D H +I EK K+S+ ++ EHLR++G YW + +D+ +L+ + E++++++L C++ GG+ GHD H+L+TL AVQ L +F+ ++ DAD +S YV GLQ DGSF GD+ GEVDTRF+ Sbjct: 23 ELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGDLSGEVDTRFT 152
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_YEAST (Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae GN=BET2 PE=1 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 68/136 (50.00%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 314 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDES-GGFAGNIGHDPHVLYTLSAVQVLALFDKLDILDAD---KVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 L +KH++YI S++ KK +FE + EHLRLNG YWGLT L +L + +E+VIS++L C D+ G FA HD H+L TLSAVQ+LA +D LD+L D ++ +++ G Q DGSF GD +GEVDTRF Y A Sbjct: 7 LLKEKHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLSCWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSFQGDRFGEVDTRFVYTA 142
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: PGTB2_CANAL (Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans GN=BET2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 62/140 (44.29%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 326 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKC-QDESGGFAGNIGHDPHVLYTLSAVQVLALFD-KLDILD----------ADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 KHV+YI+ E + SFE + EHLR+NG YWG+T L + +L A+ ++DVI +I+ C D++G F HD H+L TLSA+QVL ++D +L +L+ +++ ++ GLQ DGSF GD +GEVDTRF Y A Sbjct: 17 KHVQYIVEQESHR-SFEYWLSEHLRMNGLYWGVTALITMNELSALAQQDVIDYIMLCWDDKTGAFGSFPKHDGHILSTLSALQVLKIYDQELTVLNDNNESSNGNKRERLIKFITGLQLPDGSFQGDKYGEVDTRFVYTA 155
BLAST of CX295074 vs. ExPASy Swiss-Prot
Match: FNTB_SCHPO (Protein farnesyltransferase subunit beta OS=Schizosaccharomyces pombe GN=cpp1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 326 KHVKYIISVEKKKDSFES--VVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLD---ILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIA 709 KH+KY+ K D S V++ R YW L++L ILGKLD+ E IS + + + SGGF G G D H+L T +++ + L D D +++ D++ +++ L+N DGSF + GE D R Y A Sbjct: 33 KHLKYLT---KMLDPLPSPFTVLDASRAWMVYWELSSLAILGKLDSSVCERAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNEGESDARSVYAA 162 The following BLAST results are available for this feature:
BLAST of CX295074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295074 ID=CX295074; Name=CX295074; organism=Citrus clementina; type=EST; length=711bpback to top |