CX295077

Overview
NameCX295077
Unique NameCX295077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8146 contig Ccv1_Contig8146:654..1360. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.021e-104
Identity = 190/222 (85.59%), Postives = 203/222 (91.44%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKA 666
            NVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P+TLWLSLAPVVIGVSMASLTELSFNW GFISAMISN+SFTYRS+YSKKAMTDMDSTNIYAYISIIALFVC+PPAIIVEGPQL+KHG +DAI+KVG+ KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+AFGNKISTQ              YS IKA+MEEEKRQMK+
Sbjct:  182 NVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAMTDMDSTNIYAYISIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIKAKMEEEKRQMKS 403          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 1.630e-102
Identity = 187/223 (83.86%), Postives = 201/223 (90.13%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 669
            NVSFAAVAVSFTHT+KALEPFFNAAASQFILGQ +P+TLWLSLAPVVIGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCIPPA+I+EGP L+K G +DAI+KVG+VKF+SDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS+IKAQ+EEEKRQ KAA
Sbjct:  180 NVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAQIEEEKRQAKAA 402          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.742e-102
Identity = 184/223 (82.51%), Postives = 201/223 (90.13%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 669
            NVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P++LWLSLAPVVIGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  CIPPA++ EGPQL+KHG +DAI+KVGM+KFISDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKR+MK+A
Sbjct:  185 NVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIKARIEEEKRRMKSA 407          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.742e-102
Identity = 186/223 (83.41%), Postives = 201/223 (90.13%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 669
            NVSFAAVAVSFTHTIKALEPFFNA+ASQF+LGQ +P+TLWLSLAPVV+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC+PPAIIVEGPQL+KHG +DAI+KVGM KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKRQ K A
Sbjct:  185 NVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIKAKIEEEKRQGKTA 407          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.354e-101
Identity = 186/223 (83.41%), Postives = 199/223 (89.24%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 669
            NVSFAAVAVSFTHTIK+LEPFFNAAASQFILGQ +P+TLWLSLAPVVIGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISII+L  CIPPAII+EGPQL+KHG SDAI+KVGM KFISDLFWVGMFYHLYNQLA NTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKR +K+A
Sbjct:  186 NVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIKAKIEEEKRGLKSA 408          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.168e-100
Identity = 181/223 (81.17%), Postives = 198/223 (88.79%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 669
            NVSFAAV VSFTHT+KALEPFFNAAASQFILGQQ+PL LWLSLAPVV+GVSMASLTELSFNW GF SAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  C+PPAI +EGPQL++HG +DAI+KVG+ KF++DLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS+IKA+MEEEKRQ KAA
Sbjct:  192 NVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIKAKMEEEKRQKKAA 414          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.181e-98
Identity = 179/222 (80.63%), Postives = 198/222 (89.19%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKA 666
            NVSFAAVAVSF HTIKALEPFF+AAA+QFILGQQ+P +LWLSLAPVVIGVSMASLTELSFNWTGFI+AMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL VCIPPA+I EGP+L++HG SDAI+KVG+ KF+SDLF VG+FYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YSYIKA++EEEKR+  A
Sbjct:  188 NVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIKAKIEEEKRKKSA 409          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.370e-39
Identity = 84/185 (45.41%), Postives = 129/185 (69.73%), Query Frame = 1
Query:    4 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 552
            VS + VAVSFTH IK+ EP F+   S+FILG+  P +++LSL P++ G ++++LTEL+FN  GF+ AMISN++F +R+I+SKK M    +   N YA +S+++L +  P AI VEGPQ+   G   A++ VG  +F+  +    +FYHLYNQ++  +L++++PLT +VGN +KR+ VI  SI+ F
Sbjct:  178 VSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVG-PQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIF 361          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.271e-38
Identity = 84/192 (43.75%), Postives = 132/192 (68.75%), Query Frame = 1
Query:    4 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV---GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKI 564
            VS + VAVSFTH IK+ EP F+   S+F +G+  PL ++LSL P++ G ++A++TEL+FN TGF+ AMISN++F +R+I+SKK M    +   N YA +S+++L +  P +I VE PQ+   G  +A+S+VG     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR+ VI  SI+ F   I
Sbjct:  178 VSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGP----NFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPI 365          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.757e-31
Identity = 76/195 (38.97%), Postives = 120/195 (61.54%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL--SLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKIS 567
            N+S   V+VSFTHTIKA+EPFF+   S   LG+ +P T W+  S+ P+V GV++AS+TE+SFNW GF+SAM SN++   R++ SKK M      +D+  +++ I++++LF+  P     EG +     +  A   V + +  +      + +H Y Q++   L RV+P+TH+VGN +KRV VI  S++ F   +S
Sbjct:  182 NMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGE-VP-TPWVIGSIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNITLFSIITLMSLFLMAPVTFFSEGIKFTPSYIQSA--GVNVQQIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVS 372          
The following BLAST results are available for this feature:
BLAST of CX295077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
TPT_SPIOL1.021e-10485.59Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA1.630e-10283.86Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR4.742e-10282.51Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB4.742e-10283.41Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR2.354e-10183.41Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.168e-10081.17Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE3.181e-9880.63Triose phosphate/phosphate translocator, chloropla... [more]
GPT1_ARATH4.370e-3945.41Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
GPT2_ARATH1.271e-3843.75Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
TPT2_BRAOB9.757e-3138.97Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionC05068C12SK DroRLeaf1 Citrus clementina cDNA clone C05068C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295077 ID=CX295077; Name=CX295077; organism=Citrus clementina; type=EST; length=707bp
AACGTGTCTTTTGCAGCAGTTGCTGTCTCCTTTACCCATACCATCAAAGC
TCTTGAGCCCTTCTTCAACGCTGCTGCTTCACAATTCATTCTAGGCCAAC
AGTTACCTCTGACTCTGTGGCTGTCTCTTGCTCCTGTGGTTATTGGAGTG
TCAATGGCATCATTGACTGAGCTGTCGTTCAATTGGACGGGCTTCATTAG
TGCTATGATTTCCAACATATCGTTTACTTACAGGAGTATCTACTCCAAGA
AAGCCATGACTGATATGGACAGTACTAATATTTATGCCTATATTTCCATC
ATTGCGCTCTTTGTCTGTATTCCACCAGCCATCATTGTTGAGGGACCTCA
ACTGATTAAGCATGGCTTAAGTGATGCAATTTCCAAAGTGGGCATGGTCA
AGTTCATTTCAGATCTTTTTTGGGTGGGGATGTTTTACCACCTCTACAAT
CAGTTGGCTACCAACACCTTGGAGAGGGTTGCACCTCTTACTCATGCAGT
TGGCAATGTACTGAAACGTGTGTTTGTGATTGGGTTCTCAATCCTGGCCT
TTGGCAACAAGATCTCAACCCAAACTGGTATTGGAACAGTCATTGCAATT
GCTGGAGTGGCAGCCTACTCTTACATCAAGGCCCAAATGGAAGAAGAGAA
ACGACAAATGAAAGCAGCATGAGAAGAAAAGAAGCATGTGAATGAGGAAA
GGTCCCG
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