CX295097

Overview
NameCX295097
Unique NameCX295097
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6419 contig Ccv1_Contig6419:842..1551. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.565e-63
Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSGK 405
            VALSGAHT+GR+RP+RSGWGKPETKYTK GPG  GGQSWTV+WLKFDNSYFKDIKE+RD+DLLVLPTDA LFEDPSFK YAEKYAED  AFFKDYAEAHAKLSNLGAKFDPPEGIV+++   PEKFVAAKYS+GK
Sbjct:  235 VALSGAHTLGRARPDRSGWGKPETKYTKTGPGEAGGQSWTVKWLKFDNSYFKDIKEKRDDDLLVLPTDAALFEDPSFKNYAEKYAEDVAAFFKDYAEAHAKLSNLGAKFDPPEGIVIEN--VPEKFVAAKYSTGK 367          

HSP 2 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 2
Query:  563 QSELSEAMKQKIRAEYEAVGGSPDTPLRSNYFLNIMIVVAVLALLTSLF 709
            + ELS++MK+KIRAEYEA+GGSPD PL +NYFLNI+I + VL LL++LF
Sbjct:  367 KKELSDSMKKKIRAEYEAIGGSPDKPLPTNYFLNIIIAIGVLVLLSTLF 415          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.837e-62
Identity = 111/125 (88.80%), Postives = 118/125 (94.40%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEK 375
            VALSGAHT+GRSRP+RSGWGKPETKYTKDGPG PGGQSWTV+WLKFDNSYFKDIKE+RD+DLLVLPTDA LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLS+LGAKFDPPEG  LDD  A E+
Sbjct:  240 VALSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLGAKFDPPEGFSLDDEPAVEE 364          

HSP 2 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 2
Query:  563 QSELSEAMKQKIRAEYEAVGGSPDTPLRSNYFLNIMIVVAVLALLTSL 706
            + ELS++MKQKIRAEYE  GGSPD PL+SNYFLNIM+++  LA LTSL
Sbjct:  428 KKELSDSMKQKIRAEYEGFGGSPDKPLQSNYFLNIMLLIGGLAFLTSL 475          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.317e-59
Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 354
            VALSGAHT+GRSRPERSGWGKPETKYTK+GPGAPGGQSWT QWLKFDNSYFKDIKERRDEDLLVLPTDAVLFED SFK+YAEKYA DQ+AFF+DYAEAHAKLSNLGAKFDPP+GI L+
Sbjct:  192 VALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE 309          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.537e-59
Identity = 104/118 (88.14%), Postives = 112/118 (94.92%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 354
            V LSGAHT+GRSRPERSGWGKPETKYTK+GPGAPGGQSWT +WLKFDNSYFK+IKE+RD+DLLVLPTDA LFEDP+FKVYAEKYAEDQEAFFKDYA AHAKLSNLGAKF+PPEG  LD
Sbjct:  241 VVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLD 358          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 103/118 (87.29%), Postives = 115/118 (97.46%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 354
            VALSGAHT+GR+RPERSGWGKPETKYT++GPGAPGGQSWT +WLKFDNSYFK+IKERRDEDLLVLPTDAVLFED SFK++AEKYAEDQ+AFF+DYAEAHAKLSNLGAKFDPP+GI L+
Sbjct:  203 VALSGAHTLGRARPERSGWGKPETKYTENGPGAPGGQSWTSEWLKFDNSYFKEIKERRDEDLLVLPTDAVLFEDSSFKIHAEKYAEDQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE 320          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.747e-57
Identity = 102/117 (87.18%), Postives = 112/117 (95.73%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVL 351
            VALSGAHT+GRSRPERSGWGKPETKYTK+GPGAPGGQSWT +WLKFDNSYFK+IKE+RDEDLLVLPTDA +FED SFKVYAEKYA DQ+AFFKDYA AHAKLSNLGA+F+PPEGIV+
Sbjct:  256 VALSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLGAEFNPPEGIVI 372          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 61/134 (45.52%), Postives = 81/134 (60.45%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSG 402
            VALSG HT+G++RPERSG+         DG       +WT   LKFDNSYF ++ +   E LL LPTD  L EDP+F+ Y E YA+D++AFF+DYAE+H KLS LG  F PP    +       K +  + ++G
Sbjct:  155 VALSGGHTLGKARPERSGF---------DG-------AWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELG--FTPPRSAFIYKSCQKPKSLLMQTAAG 270          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 61/134 (45.52%), Postives = 81/134 (60.45%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSG 402
            VALSG HT+G++RPERSG+         DG       +WT   LKFDNSYF ++ +   E LL LPTD  L EDP+F+ Y E YA+D++AFF+DYAE+H KLS LG  F PP    +       K +  + ++G
Sbjct:  155 VALSGGHTLGKARPERSGF---------DG-------AWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELG--FTPPRSAFIYKSCQKPKSLLMQTAAG 270          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.860e-23
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDP 333
            VALSG HT+GR+ PERSG+         DGP       WT + LKFDNSYF ++ +   E LL LPTD  L EDP F+   E YA+D++AFF+DYAE+H KLS LG  F+P
Sbjct:  154 VALSGGHTLGRAHPERSGF---------DGP-------WTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELG--FNP 246          
BLAST of CX295097 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22
Identity = 56/106 (52.83%), Postives = 68/106 (64.15%), Query Frame = 1
Query:    1 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 318
            VALSG HT+GR+ PERSG+            GA     WT + LKFDNSYF ++ +   E LL LPTD  L EDPSF+ Y + YA D++ FFKDYAE+H KLS LG
Sbjct:  154 VALSGGHTLGRAHPERSGF-----------EGA-----WTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELG 243          
The following BLAST results are available for this feature:
BLAST of CX295097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
APXT_ARATH2.565e-6385.19L-ascorbate peroxidase T, chloroplastic OS=Arabido... [more]
APX8_ORYSJ4.837e-6288.80Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
APX6_ORYSJ1.317e-5990.68Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
APX7_ORYSJ6.537e-5988.14Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX5_ORYSJ4.237e-5887.29Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
APXS_ARATH2.747e-5787.18L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
APX3_ORYSJ6.828e-2445.52Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI6.828e-2445.52Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ARATH9.860e-2352.25L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ2.869e-2252.83Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC05068E10SK DroRLeaf1 Citrus clementina cDNA clone C05068E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295097 ID=CX295097; Name=CX295097; organism=Citrus clementina; type=EST; length=710bp
GTTGCCTTATCTGGTGCACACACAGTGGGAAGGTCTAGACCTGAACGAAG
TGGTTGGGGCAAGCCAGAAACAAAGTACACGAAAGATGGACCAGGAGCAC
CTGGTGGGCAGTCCTGGACAGTACAATGGTTGAAATTTGACAACTCCTAC
TTCAAGGATATTAAAGAAAGAAGGGACGAAGATTTACTCGTGCTGCCTAC
TGATGCTGTTCTTTTTGAAGATCCTTCATTCAAGGTTTATGCTGAGAAAT
ATGCTGAGGATCAGGAAGCATTCTTTAAGGATTATGCTGAAGCCCATGCC
AAACTCAGCAACCTTGGGGCAAAATTTGACCCTCCTGAGGGTATCGTGCT
AGATGATGGTGCTGCTCCAGAGAAGTTTGTAGCAGCCAAGTATTCGTCCG
GAAAGGACTGAAAAAACAAGTAACTTTGTTTTCTTGTGCCGTATGTTATA
ATAATACAAGATGAAGGTTTTTTGAAATCCTGTGTGTGCTTCACACCTAA
AACTTGGAAGTCTAAGTGAAGGTGAAAGAATAAAATTCAATTAGTGTTGG
CTATTTGAATTGCAGAGTGAGCTGTCAGAGGCTATGAAGCAGAAGATACG
GGCAGAGTATGAAGCCGTTGGTGGAAGCCCAGATACACCTCTACGGTCAA
ACTATTTCCTGAATATTATGATTGTGGTTGCTGTTTTGGCACTTTTGACA
TCTCTCTTTG
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