CX295141

Overview
NameCX295141
Unique NameCX295141
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig616 contig Ccv1_Contig616:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295141 vs. ExPASy Swiss-Prot
Match: UMP3_ARATH (Uncharacterized protein At5g10860, mitochondrial OS=Arabidopsis thaliana GN=At5g10860 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.248e-79
Identity = 147/179 (82.12%), Postives = 164/179 (91.62%), Query Frame = 1
Query:  166 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 699
            MQG I+SF+S GN+VK +VLQ +R++NP ++P V  SR ES   ARMEE GFESTTISD++K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMTDNRIRHIPVI DKGMIGMVS
Sbjct:    1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVS 179          
BLAST of CX295141 vs. ExPASy Swiss-Prot
Match: Y525_METKA (Uncharacterized protein MK0525 OS=Methanopyrus kandleri GN=MK0525 PE=4 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 1
Query:  397 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVS 699
            +T  +    M +H +G++V+V   E+    GIITERD + K++ QG++       DIM++   +ITV  D +V  A++LM D  IR +P++DD G +IG+V+
Sbjct:   21 ETAVEIAYKMREHGIGSVVIVN--EKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQP--VITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVT 118          
BLAST of CX295141 vs. ExPASy Swiss-Prot
Match: YHCV_BACSU (CBS domain-containing protein yhcV OS=Bacillus subtilis GN=yhcV PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 1
Query:  394 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVS 699
            + T+ +A   M QHNVGA+ VV+ G  K   G++T+RD   +   QGR  + T V ++M+ E  L++ +P+  +  A QLM  ++IR +P++D   ++G+V+
Sbjct:   18 NQTIQEAASLMKQHNVGAIPVVEQGVLK---GMLTDRDIALRTTAQGRDGQ-TPVSEVMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVA 113          
The following BLAST results are available for this feature:
BLAST of CX295141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
UMP3_ARATH4.248e-7982.12Uncharacterized protein At5g10860, mitochondrial O... [more]
Y525_METKA1.702e-1137.25Uncharacterized protein MK0525 OS=Methanopyrus kan... [more]
YHCV_BACSU8.446e-1135.29CBS domain-containing protein yhcV OS=Bacillus sub... [more]
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Properties
Property NameValue
Genbank descriptionC05069A06SK PhIFruit1 Citrus clementina cDNA clone C05069A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295141 ID=CX295141; Name=CX295141; organism=Citrus clementina; type=EST; length=700bp
ATCAAATAGGAAAAGAAGTAAAGAATTAGGATCACGGGTCACTCTCACCC
ACTGCCATTTCCTTCTTATTCTATTTGGGTTACAGCAGGTCTCTCAATCT
TATCCCGTATCTGCTGCTTCTGCCGCCGCCACCAGTATTGCTCTCTCACA
CTCACAGGAAAAAAAATGCAAGGGGCAATTCAATCATTTCTATCCCATGG
AAATATCGTCAAATCTGCTGTTCTGCAACGCATCCGTTTGGTCAATCCGA
TGCTTAGGCCTGTAGTTTCTTCGCGGTTCGAGTCGGTTTCATCTGCTCGT
ATGGAAGAGCATGGTTTCGAGAGCACAACAATTTCAGACATATTGAAAGC
AAAAGGTAAAGGTGCGGATGGCTCTTGGCTTTGGTGCACTACTGATGACA
CTGTCTATGATGCTGTCAAGTCGATGACACAGCATAACGTTGGAGCGTTG
GTCGTCGTCAAACCCGGAGAGCAAAAGTCTGTTGCTGGGATCATCACAGA
GAGAGATTATCTCAGGAAGATCATAGTGCAGGGAAGATCATCCAAGTCAA
CTAAAGTTGGGGACATCATGACTGAAGAGAACAAGCTGATCACAGTCTCA
CCTGACACCAAAGTTCTGCGGGCAATGCAATTGATGACAGATAACCGTAT
TCGGCACATTCCAGTAATTGATGACAAGGGAATGATAGGCATGGTGTCCA
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