CX295148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.389e-77 Identity = 140/217 (64.52%), Postives = 173/217 (79.72%), Query Frame = 1 Query: 58 MYRATVSRLGSLKGRLGNFQAMRYATSGAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLEGVSFPPSLPDFVEPGEVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 MYR SRL SLK R GN R+++S A A +PS G FSW+TG+ SSS+ LD PL V P LPD+VEP + ++TTL NG+++ASE SV+PAASIGLY+DCGS+YETP+S GA++LLE+MAFKST NRSHLRIVRE+EAIGG++ ASASRE M Y++DALKTYVP+MVE+L DCVRNP FLDWEV E+L K+K+E+ E NPQ LLLEA+HS Sbjct: 1 MYRCASSRLSSLKARQGNRVLTRFSSSAAVATKPSG-GLFSWITGDTSSSVTPLDFPLNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHS 216
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.712e-75 Identity = 145/218 (66.51%), Postives = 170/218 (77.98%), Query Frame = 1 Query: 58 MYRATVSRLGSLKGRLG-NFQAMRYATSGAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLEGVSFPPSLPDFVEPGEVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 MYR SR +LKG L NF+A RYA+S A A SS SWL+G SSSLPS++ PL GVS PP L D VEP ++K TTL NG+ IA+E S +PAASIGLY+DCGS+YETP GA++LLE+MAFKST NRSH R+VRE+EAIGG+ ASASREQMGY+ DALKTYVPEMVE+L+D VRNP FLDWEVNEELRK+K E+GE NP G LLEA+HS Sbjct: 1 MYRTAASRAKALKGILNHNFRASRYASSSAVATSSSSS---SWLSGGYSSSLPSMNIPLAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHS 215
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.357e-72 Identity = 139/219 (63.47%), Postives = 170/219 (77.63%), Query Frame = 1 Query: 58 MYRATVSRLGSLKGRLG-NFQAMRYATSGAAAVRPSS-PGFFSWLTGEQSSSLPSLDTPLEGVSFPPSLPDFVEPGEVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 MYR SR +LKG L + + RYA+S A A SS P + SWL+G ++L SLD PL+GVS PP L D VEP ++++TTL NG++IASET+ +PAASIGLY+DCGS+YE P GA++LLE+MAFKST NR+H R+VRE+EAIGG+ ASASREQM Y+ DALKTYVPEMVE+L+D VRNP FLDWEVNEELRK+K E+ EL NP G LLEAIHS Sbjct: 1 MYRTAASRARALKGVLTRSLRPARYASSSAVAETSSSTPAYLSWLSGGSRAALTSLDMPLQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHS 219
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 54/143 (37.76%), Postives = 87/143 (60.84%), Query Frame = 1 Query: 280 EVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 E +V+ L+NG+R+ASE S P ++G+++D GS YET + GA LE +AFK TKNR + +EVE+IG + A ++RE Y AL +P++VELL D V+N D ++ +E + E+ E + Q ++ + +H+ Sbjct: 47 ETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERDVILREMQENDASMQNVVFDYLHA 189
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 54/143 (37.76%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 280 EVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 E +VT LENG+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E + E+ E+ N Q ++ + +H+ Sbjct: 57 ETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHA 199
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 54/143 (37.76%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 280 EVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 E +VT LENG+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E + E+ E+ N Q ++ + +H+ Sbjct: 57 ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHA 199
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 54/143 (37.76%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 280 EVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 E +VT LENG+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E + E+ E+ N Q ++ + +H+ Sbjct: 58 ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHA 200
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 53/143 (37.06%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 280 EVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 E +V+ L+NG+R+ASE S ++G+++D GS YET + GA LE +AFK TKNR + +EVE+IG + A ++RE Y AL +P++VELL D V+N D ++ +E + E+ E + Q ++ + +H+ Sbjct: 47 ETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQNVVFDYLHA 189
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20 Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 280 EVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 E +VT LE+G+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E + E+ E+ N Q ++ + +H+ Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHA 199
BLAST of CX295148 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20 Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 280 EVKVTTLENGIRIASETSVSPAASIGLYLDCGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHS 708 E +VT LE+G+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E + E+ E+ N Q ++ + +H+ Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHA 199 The following BLAST results are available for this feature:
BLAST of CX295148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295148 ID=CX295148; Name=CX295148; organism=Citrus clementina; type=EST; length=709bpback to top |