CX295212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.642e-56 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTVHLYTLNMEK 539 VDAGADLIITQLFYDTD+FLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLG EMCKKILA GIKT+HLYTLNMEK Sbjct: 183 VDAGADLIITQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGTEMCKKILATGIKTLHLYTLNMEK 291
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.229e-54 Identity = 96/109 (88.07%), Postives = 106/109 (97.25%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTVHLYTLNMEK 539 +DAGADLI+TQLFYDTD+FLKFVNDCRQIGI+CPIVPGIMPINNY+GFLRMTGFCKTKIP E+ AALEPIKDNEEAVKAYGIHLG EMCKK+LAHG+K++HLYTLNMEK Sbjct: 183 IDAGADLIVTQLFYDTDIFLKFVNDCRQIGISCPIVPGIMPINNYRGFLRMTGFCKTKIPVEVMAALEPIKDNEEAVKAYGIHLGTEMCKKMLAHGVKSLHLYTLNMEK 291
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.229e-54 Identity = 99/109 (90.83%), Postives = 106/109 (97.25%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTVHLYTLNMEK 539 VDAGADLI+TQLFYDTD+FLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIP+EITAAL+PIKDNEEAV+ YGIHLG EMCKKILA GIKT+HLYTLNM+K Sbjct: 183 VDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPSEITAALDPIKDNEEAVRQYGIHLGTEMCKKILATGIKTLHLYTLNMDK 291
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.733e-52 Identity = 94/109 (86.24%), Postives = 103/109 (94.50%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTVHLYTLNMEK 539 VDAGADLI+TQLFYDTD+FLKFVNDCRQIGI CPIVPGIMPI+NYKGFLRM GFCKTKIPAE+TAALEPIKDN+EAVKAYGIH EMCKKILAHGI ++HLYTLN++K Sbjct: 183 VDAGADLIVTQLFYDTDIFLKFVNDCRQIGINCPIVPGIMPISNYKGFLRMAGFCKTKIPAELTAALEPIKDNDEAVKAYGIHFATEMCKKILAHGITSLHLYTLNVDK 291
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26 Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTVHLYTLNME 536 V AGAD IITQLF++ D F +FV C +GITCPIVPGI PI Y ++ K ++P EI +EPIKDN+ A++ YGI L +C+++LA G + +H YTLN E Sbjct: 218 VSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNRE 326
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25 Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTVHLYTLNME 536 V AGAD IITQLF++ D F +FV C +GITCPIVPGI PI Y ++ K ++P EI +EPIKDN+ A++ YGI L +C ++LA G + +H YTLN E Sbjct: 218 VSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKQSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCHELLASGLVPGLHFYTLNRE 326
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTVHLYTLNME 536 V AGAD IITQLF++ + F +FV C +IGITCP++PGI PI Y ++ K ++P +I +EPIKDN+ A++ YGI +C+++LA G + +H YTLN E Sbjct: 217 VAAGADFIITQLFFEAETFFRFVKACSEIGITCPVLPGIFPIQGYHSLRQLVKLSKLEVPQQIKDVIEPIKDNDAAIRNYGIEQAVSLCQELLASGLVPGLHFYTLNRE 325
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24 Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 201 LIL*VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTVHLYTLNMEK 539 L L VD GAD I+TQ+FYD D F+ +V+ R GI PI PGIMPI + F+R + KIP L P+KD++E V+ G+ L EMC+K++A GI +H YT+N+EK Sbjct: 170 LKLKVDEGADFIVTQMFYDVDNFIAWVDKVRAAGINIPIFPGIMPIQAWDSFIRRAKWSGVKIPQHFMDTLVPVKDDDEGVRERGVELIVEMCRKLIASGITRLHFYTMNLEK 282
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24 Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 216 DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTVHLYTLNME 536 DAGA+ +ITQLF++ + F KFV DCR+IGIT PI+PGIMPI Y+ R+ + +IP I LEPIK +++AV+ YG EMC+++L +G ++HLYT+N E Sbjct: 232 DAGANFVITQLFFEAETFEKFVRDCREIGITQPIIPGIMPIMGYESIKRIAKLSQLEIPQHILDDLEPIKHDDDAVQKYGTERCIEMCRRLLDNGTAPSIHLYTMNRE 339
BLAST of CX295212 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 213 VDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTVHLYTLNME 536 V AGAD IITQLF++ F FV C +IGI+CPI+PGI PI Y ++ K ++P +I +EPIKDN+ A++ YGI L +C+++L G + +H YTLN E Sbjct: 217 VSAGADFIITQLFFEASTFFSFVKACTEIGISCPILPGIFPIQGYTSLRQLVKLSKLEVPQKIKDVIEPIKDNDAAIRNYGIELAVRLCRELLDSGLVPGLHFYTLNRE 325 The following BLAST results are available for this feature:
BLAST of CX295212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295212 ID=CX295212; Name=CX295212; organism=Citrus clementina; type=EST; length=664bpback to top |