CX295222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.464e-46 Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGF 716 FSFSTLFFSH+E T ++L R SSYTASLTSILTV QLSSPIK I++L + DPIGY +GSF +YL ELNI SRLVPL + EEY+KAL DGP GGV+AV+DERAY+E+FLS RCEF I+GQEFT+ GWGF Sbjct: 619 FSFSTLFFSHRETTTSNLGRIVLIIWLFVVLIINSSYTASLTSILTVHQLSSPIKGIETLQTNHDPIGYPQGSFVRDYLIHELNIHVSRLVPLRSPEEYDKALRDGPGKGGVAAVVDERAYIELFLSNRCEFGIVGQEFTKNGWGF 764
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.261e-46 Identity = 91/146 (62.33%), Postives = 110/146 (75.34%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGF 716 FSFST+FF+H+E TV++L R SSYTASLTSILTV+QLSSPIK I+SL DPIGYQ GSFAE+YL +ELNI +SRLVPL T E Y KAL DGP GGV+A++DER Y+E+FLS+ C + I+GQEFT+ GWGF Sbjct: 629 FSFSTMFFAHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLRERDDPIGYQVGSFAESYLRNELNISESRLVPLGTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSGWGF 774
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.852e-41 Identity = 86/146 (58.90%), Postives = 110/146 (75.34%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGF 716 F+FST+FFSH+E TV++L R TSSYTASLTSILTV+QL+SPIK + +L++S+ IG+Q GSFAENY+TDELNI SRLVPL + EEY AL +NG V+A++DER Y+++FLS C+F+I GQEFTR GWGF Sbjct: 630 FTFSTMFFSHRETTVSTLGRMVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIKGVDTLISSTGRIGFQVGSFAENYMTDELNIASSRLVPLASPEEYANAL----QNGTVAAIVDERPYIDLFLSDYCKFAIRGQEFTRCGWGF 771
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 4.561e-40 Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGF 716 FSFST+FFSH+E TV++L R TSSYTASLTSILTV+QL+SPI+ + +L++SS +G+Q GS+AENY+ DELNI +SRLVPL + +EY AL +NG V+A++DER Y+++FLS C F+I GQEFTR GWGF Sbjct: 630 FSFSTMFFSHRENTVSTLGRAVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIRGVDTLISSSGRVGFQVGSYAENYMIDELNIARSRLVPLGSPKEYAAAL----QNGTVAAIVDERPYVDLFLSEFCGFAIRGQEFTRSGWGF 771
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 8.602e-39 Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFL-STRCEFSIIGQEFTRIGWGF 716 FSFST+FFSH+E TV+SL R SSYTASLTSILT+ QL+S I+ I SLV S++PIG Q G+FA NYL +ELNI SR+VPL E+Y AL GP GGV+A++DE Y+EV L ++ C+F +GQEFTR GWGF Sbjct: 656 FSFSTMFFSHRENTVSSLGRFVLIIWLFVVLIINSSYTASLTSILTIRQLTSRIEGIDSLVTSNEPIGVQDGTFARNYLINELNILPSRIVPLKDEEQYLSALQRGPNAGGVAAIVDELPYIEVLLTNSNCKFRTVGQEFTRTGWGF 802
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.124e-38 Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGF 716 FSFSTLFF+H+E T ++L R SSYTASLTSILTV+QL+SPI I SL+ S PIG+Q GSFAENYL EL + SRL L + EEY+KAL GP GGV+A++DER Y+E+FL +F+++G EFT+ GWGF Sbjct: 631 FSFSTLFFAHREDTRSTLGRFVIIIWLFVVLIIQSSYTASLTSILTVQQLTSPITGIDSLITSDVPIGFQVGSFAENYLAQELGVAHSRLKALGSPEEYKKALDLGPSKGGVAAIVDERPYIELFLYQNPKFAVVGSEFTKSGWGF 776
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.119e-37 Identity = 78/147 (53.06%), Postives = 104/147 (70.75%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLS-TRCEFSIIGQEFTRIGWGF 716 FSFST+FFSH+E TV++L R SSYTASLTSILTV+QL+S I+ + +L+AS++PIG Q G+FA +L +ELNI SR++PL EEY AL GP+ GGV+A++DE Y++ LS + C+F +GQEFTR GWGF Sbjct: 649 FSFSTMFFSHRENTVSTLGRFVLLVWLFVVLIINSSYTASLTSILTVQQLTSRIEGMDTLIASNEPIGVQDGTFAWKFLVNELNIAPSRIIPLKDEEEYLSALQRGPRGGGVAAIVDELPYIKALLSNSNCKFRTVGQEFTRTGWGF 795
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.380e-34 Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKN-GGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGF 716 FSFSTLF ++E T+++L+R T+SYTA+LTSILTV+QL S I I SL AS PIGYQ G+F YLT L + +SRLVPL++ EEYEKAL GP N GGV+A++DE Y+E+FL+ R F I+G+ F GWGF Sbjct: 621 FSFSTLFKRNQEDTISNLARLVMIVWLFLLMVLTASYTANLTSILTVQQLPSAITGIDSLRASEVPIGYQAGTFTLEYLTYSLGMARSRLVPLDSTEEYEKALKLGPTNWGGVAAIVDELPYIELFLAERTGFKIVGEPFMHRGWGF 767
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR23_ARATH (Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.243e-20 Identity = 57/151 (37.75%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 270 LCRFSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLSTRCE-FSIIGQEFTRIGWGFV 719 +C F+FST+ F+ +ER + +R T SYTASL S+LT ++L+ I + SL+ + +GYQR SF L E +S LVP +TAEE ++ L+ GPK GGVS E Y+ +FL C + ++ + F G+GFV Sbjct: 620 ICWFAFSTMVFAPRERVFSFWARALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTITSMSSLLEKGETVGYQRTSFILGKL-KERGFPQSSLVPFDTAEECDELLSKGPKKGGVSGAFLEIPYLRLFLGQFCNTYKMVEEPFNVDGFGFV 769
BLAST of CX295222 vs. ExPASy Swiss-Prot
Match: GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20 Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 3 Query: 279 FSFSTLFFSHKERTVNSLSRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPIKDIQSLVASSDPIGYQRGSFAENYLTDELNIDKSRLVPLNTAEEYEKALTDGPKNGGVSAVIDERAYMEVFLSTRC-EFSIIGQEFTRIGWGF 716 FSFSTLFF+H+ + + +R T SYTA+LTS+LTV++L ++ + L S IGYQ GSF L ++ D+SRL N+ EE + NGG+ A DE AY+++F++ C E+SII F G+GF Sbjct: 628 FSFSTLFFAHRRPSESFFTRVLVVVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDDLRKSGVNIGYQTGSFTFERL-KQMRFDESRLKTYNSPEEMRELFLHKSSNGGIDAAFDEVAYIKLFMAKYCSEYSIIEPTFKADGFGF 773 The following BLAST results are available for this feature:
BLAST of CX295222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295222 ID=CX295222; Name=CX295222; organism=Citrus clementina; type=EST; length=773bpback to top |