CX295239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.240e-56 Identity = 111/143 (77.62%), Postives = 118/143 (82.52%), Query Frame = 3 Query: 39 RKRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 +K + F GLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKKELDALLSDE+L +VPFL+LGNKIDIPYAASE+ELRYHLGLSNFTTGKGKVNL Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNL 160
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 6.155e-56 Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 3 Query: 39 RKRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 +K + F GLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKKELDALLSDE+L VPFL+LGNKIDIPYAASE+ELRYHLGLSNFTTGKGKV+L Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDL 160
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.791e-55 Identity = 109/143 (76.22%), Postives = 116/143 (81.12%), Query Frame = 3 Query: 39 RKRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 +K + F GLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESK+ELDALLSDEAL VPFL+LGNKIDIPYAASE+ELRYHLGL+NFTTGKGKV L Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTL 160
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 3.377e-54 Identity = 107/144 (74.31%), Postives = 115/144 (79.86%), Query Frame = 3 Query: 39 RKRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLA 470 +K + F GLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERF+ESKKELDALLSD+AL VPFL+LGNKID PYAASE+ELRYHLGL+NFTTGKGKV A Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTA 161
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.676e-53 Identity = 105/144 (72.92%), Postives = 113/144 (78.47%), Query Frame = 3 Query: 39 RKRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLA 470 +K + F GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIG IKFKAFDLGGHQIARRVW ERF E+KKELD LLSDE+L NVPFL+LGNKIDIPYAASE+ELRYHLGL+ TTGKG +NLA Sbjct: 18 QKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLA 161
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.498e-41 Identity = 84/142 (59.15%), Postives = 98/142 (69.01%), Query Frame = 3 Query: 42 KRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 K + F GLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG++KF +DLGGHQ ARR+W ERFAE++ ELDALLS E L +VPFL+LGNKID P A SEEELR +GL TTGKGKV L Sbjct: 19 KNAKILFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQ-TTGKGKVPL 159 HSP 2 Score: 34.6538 bits (78), Expect = 2.498e-41 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 WFYGVLASLGLWQKEAKILFLG 67 WF+ +LA LGL K AKILFLG Sbjct: 6 WFWDILAQLGLAHKNAKILFLG 27
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1_NEOFI (Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.256e-41 Identity = 83/142 (58.45%), Postives = 95/142 (66.90%), Query Frame = 3 Query: 42 KRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 K + F GLDNAGKTTLLHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+W ERF ESK ELDALL+ E L VPFL+LGNKID P A SE+ELR+ LGL TTGKGKV L Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL 159 HSP 2 Score: 38.1206 bits (87), Expect = 3.256e-41 Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 WFYGVLASLGLWQKEAKILFLG 67 WFY VLASLGL K AK+LFLG Sbjct: 6 WFYDVLASLGLLNKHAKLLFLG 27
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.256e-41 Identity = 83/142 (58.45%), Postives = 95/142 (66.90%), Query Frame = 3 Query: 42 KRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 K + F GLDNAGKTTLLHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+W ERF ESK ELDALL+ E L VPFL+LGNKID P A SE+ELR+ LGL TTGKGKV L Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL 159 HSP 2 Score: 38.1206 bits (87), Expect = 3.256e-41 Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 WFYGVLASLGLWQKEAKILFLG 67 WFY VLASLGL K AK+LFLG Sbjct: 6 WFYDVLASLGLLNKHAKLLFLG 27
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.242e-41 Identity = 81/142 (57.04%), Postives = 96/142 (67.61%), Query Frame = 3 Query: 42 KRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 K + F GLDNAGKTTLLHMLK++R+ QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ERF E+K ELDALLS E L VPF++LGNKID P A SE+ELR+ LGL TTGKG+V L Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQL 159 HSP 2 Score: 36.965 bits (84), Expect = 4.242e-41 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 WFYGVLASLGLWQKEAKILFLG 67 WFY VL+SLGL K AK+LFLG Sbjct: 6 WFYDVLSSLGLLNKHAKLLFLG 27
BLAST of CX295239 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 4.242e-41 Identity = 83/142 (58.45%), Postives = 96/142 (67.61%), Query Frame = 3 Query: 42 KRPRSCF*GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKELDALLSDEALPNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 467 K + F GLDNAGKTTLLHMLK++R+ QPT +PTSEELSIG ++F FDLGGHQ ARR+W ERF E+K ELDALLS E L VPF+VLGNKID P A SE+ELR+ LG+ TTGKGKV L Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQ-TTGKGKVPL 159 HSP 2 Score: 36.965 bits (84), Expect = 4.242e-41 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 WFYGVLASLGLWQKEAKILFLG 67 WFY VL+SLGL K AK+LFLG Sbjct: 6 WFYDVLSSLGLLNKHAKLLFLG 27 The following BLAST results are available for this feature:
BLAST of CX295239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295239 ID=CX295239; Name=CX295239; organism=Citrus clementina; type=EST; length=471bpback to top |