CX295247
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1) HSP 1 Score: 412.92 bits (1060), Expect = 8.637e-115 Identity = 203/238 (85.29%), Postives = 218/238 (91.60%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANSTFWK 723 +KYPTMSPL+E+VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEHLVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRIAAREKGFQ+RDFE S EAQE+R QEL KLV DQESLRSSLLQWCYTSYGEVFSSWMHFCAVR FAESI+RYGLPP+FLACVL+P+VK EKKVRSILE LC + NS +WK Sbjct: 110 AKYPTMSPLKEVVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEHLVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAAREKGFQVRDFEQSVEAQETRKQELAKLVQDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRTFAESIMRYGLPPAFLACVLSPAVKSEKKVRSILERLCDSTNSLYWK 347
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC_HORVU (V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.592e-76 Identity = 151/226 (66.81%), Postives = 177/226 (78.32%), Query Frame = 1 Query: 13 KYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSS-LLQWCYTSYGEVFSSWMHF-CAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSIL 684 KYP +PL+E V I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+GSLAVRDLSNL+KPED++TSEHLVTLL++VPKYSQKDWLASYE+L ++VVPRSSK LYEDNEYALYTVTLF +V DNF++ AREKGFQIRDFEYS EAQESR QELEKL+ DQE +R+S + + VFSSW F AVRVF ESILRYG + C + K +K + L Sbjct: 116 KYPVNAPLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDMVTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFKVHAREKGFQIRDFEYSPEAQESRKQELEKLLQDQEVMRTSPIAMGAMLATVRVFSSWDAFSSAVRVFVESILRYGSACTVPVCCPSTIYKEREKSKEHL 341
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VTC1A_DANRE (V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.604e-52 Identity = 101/236 (42.80%), Postives = 157/236 (66.53%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 714 +KYP L+ I + I V++I++DLK R + YNN++ L + RK +GSL R L+++VK +D ++ SE+L+TLL VVPK + DW +YETL VVPRS+ LL+ED++ L+TVTLF + D+FR ARE F +RDF+Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L +L + +S+ Sbjct: 110 AKYPIKQSLKNISEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLFEDHDSGLFTVTLFRKAIDDFRHKARENKFTVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWVHIKALRVFVESVLRYGLPVNFQAMLLQPNKKNMKKLREVLYDLYKHLDSS 345
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC1_RAT (V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.737e-51 Identity = 102/236 (43.22%), Postives = 150/236 (63.56%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 714 +KYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL VVPRSS +L ED + L VTLF + D+FR ARE F +RDF+Y+ E + +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 110 AKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFKKAVDDFRHKARENKFIVRDFQYNEEEMRADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAMLLQPNKKSVKKLREVLHELYKHLDSS 345
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC1_MOUSE (V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4) HSP 1 Score: 200.675 bits (509), Expect = 6.737e-51 Identity = 102/236 (43.22%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 714 +KYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL VVPRSS +L ED + L VTLF + D+FR ARE F +RDF+Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 110 AKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAMLLQPNKKSVKKLREVLHELYKHLDSS 345
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC1_PONAB (V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.501e-50 Identity = 102/236 (43.22%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 714 +KYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL VVPRSS +L ED + L VTLF + D+FR ARE F +RDF+Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 110 AKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSS 345
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC1_MACFA (V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.501e-50 Identity = 102/236 (43.22%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 714 +KYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL VVPRSS +L ED + L VTLF + D+FR ARE F +RDF+Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 110 AKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSS 345
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC1_HUMAN (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4) HSP 1 Score: 199.519 bits (506), Expect = 1.501e-50 Identity = 102/236 (43.22%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 714 +KYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL VVPRSS +L ED + L VTLF + D+FR ARE F +RDF+Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 110 AKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSS 345
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC_DROME (V-type proton ATPase subunit C OS=Drosophila melanogaster GN=Vha44 PE=1 SV=5) HSP 1 Score: 199.134 bits (505), Expect = 1.960e-50 Identity = 98/232 (42.24%), Postives = 151/232 (65.09%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGN 702 +KYP LR I D I + +I+ DLK + YNN++ L + +K++GSL R+L++LVK E I+ SE+L TLL +VPK DWL +YE +T +VPRSS+L+ ED +Y L+ VTLF +VA+ F++ ARE+ F +RDF Y+ E + E+ KL+ D++ L++W ++ E F + +H A+RVF ES+LRYGLP +F A ++ P+ K K++R +L +L G+ Sbjct: 559 AKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGNLQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYEKITDMIVPRSSQLIQEDADYCLFNVTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEMTKLMTDKKKQFGPLVRWLKVNFSEAFCALIHVKALRVFVESVLRYGLPVNFQAILIEPNKKSVKRLRDVLNQLYGH 790
BLAST of CX295247 vs. ExPASy Swiss-Prot
Match: VATC1_BOVIN (V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3) HSP 1 Score: 199.134 bits (505), Expect = 1.960e-50 Identity = 102/236 (43.22%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 10 SKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 714 +KYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ YETL VVPRSS +L ED + L VTLF + D+FR ARE F +RDF+Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 110 AKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTMKKLREVLYELYKHLDSS 345 The following BLAST results are available for this feature:
BLAST of CX295247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295247 ID=CX295247; Name=CX295247; organism=Citrus clementina; type=EST; length=724bpback to top |