CX295248

Overview
NameCX295248
Unique NameCX295248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:735..1415. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 1.455e-113
Identity = 202/219 (92.24%), Postives = 213/219 (97.26%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ QIIKDIREFKEKNKVD+VVVLWTANTERYSNV+VGLNDT+ENL AS+D+NEAEISPSTLYAIAC+LEN+PFINGSPQNTFVPGLIDLAI+RN LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHP
Sbjct:  162 DLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQIDQIIKDIREFKEKNKVDKVVVLWTANTERYSNVVVGLNDTMENLFASVDRNEAEISPSTLYAIACILENVPFINGSPQNTFVPGLIDLAIKRNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHP 380          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 407.527 bits (1046), Expect = 3.242e-113
Identity = 201/219 (91.78%), Postives = 213/219 (97.26%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ QIIKDIREFKEKNKVD+VVVLWTANTERYSNV+VGLNDT+ENL AS+D+NEAEISPSTLYAIAC+LEN+PFINGSPQNTFVPGLIDLAI++N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHP
Sbjct:  162 DLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQIDQIIKDIREFKEKNKVDKVVVLWTANTERYSNVVVGLNDTMENLFASVDRNEAEISPSTLYAIACILENVPFINGSPQNTFVPGLIDLAIKKNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHP 380          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 5.531e-113
Identity = 206/214 (96.26%), Postives = 209/214 (97.66%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG 665
            ++QKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVE+LLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN    G
Sbjct:  162 DLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVESLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNVFFMG 375          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 405.986 bits (1042), Expect = 9.434e-113
Identity = 201/219 (91.78%), Postives = 210/219 (95.89%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYMESM PLPGIYD DFIAANQGSRANNVIKGTKKEQM Q+IKDIREFKEKNKVD+VVVLWTANTERYSNV VGLNDT ENLLAS+DKNEAEISPSTLYAIACV+E +PFINGSPQNTFVPGLIDLAI+ +CLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHP
Sbjct:  162 DLQKQLRPYMESMCPLPGIYDPDFIAANQGSRANNVIKGTKKEQMEQVIKDIREFKEKNKVDKVVVLWTANTERYSNVSVGLNDTTENLLASVDKNEAEISPSTLYAIACVMEGVPFINGSPQNTFVPGLIDLAIKNDCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHP 380          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 405.601 bits (1041), Expect = 1.232e-112
Identity = 203/219 (92.69%), Postives = 211/219 (96.35%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQM QIIKDIREFKEK+KVD+VVVLWTANTERYSNV VGLNDT+ENLLAS+DKNEAEISPSTLYAIACV+E IPFINGSPQNTFVPGLIDLAI+ NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY  GEHP
Sbjct:  162 DLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKEKSKVDKVVVLWTANTERYSNVCVGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQNTFVPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYELGEHP 380          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 403.29 bits (1035), Expect = 6.115e-112
Identity = 196/219 (89.50%), Postives = 213/219 (97.26%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQ+RP+ME MVPLPGI+D DFIAANQGSRAN+VIKGTKK+Q+ Q+IKDIREFKEKNKVD+VVVLWTANTERYSNV+VGLNDT ENL++SLDK+EAEISPSTLYAIACVLEN+PFINGSPQNTFVPGLI+LAI+RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV SNGILY PGEHP
Sbjct:  162 DLQKQMRPFMEHMVPLPGIFDPDFIAANQGSRANHVIKGTKKQQLEQVIKDIREFKEKNKVDKVVVLWTANTERYSNVVVGLNDTTENLMSSLDKDEAEISPSTLYAIACVLENVPFINGSPQNTFVPGLIELAIKRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVGSNGILYEPGEHP 380          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 403.29 bits (1035), Expect = 6.115e-112
Identity = 198/219 (90.41%), Postives = 210/219 (95.89%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYMESMVPLPGIYD DFIAANQGSRAN+VIKGTKKEQ+ QIIKDIREFKEKNKVD++VVLWTANTERYSNV  GLNDT+ENLLAS+DKNEAE+SPSTLYAIACV+E +PFINGSPQNTFVPGLIDLAI+ NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQ FRSKEISKSNVVDDMVSSN ILY PGEHP
Sbjct:  162 DLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANSVIKGTKKEQVEQIIKDIREFKEKNKVDKIVVLWTANTERYSNVCAGLNDTMENLLASVDKNEAEVSPSTLYAIACVMEGVPFINGSPQNTFVPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQAFRSKEISKSNVVDDMVSSNAILYEPGEHP 380          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.177e-111
Identity = 196/219 (89.50%), Postives = 212/219 (96.80%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYME MVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ QIIKD+R+FKE+NKVD+VVVLWTANTERYSNV+VGLNDT E+L+AS+++NEAEISPSTLYAIACV EN+PFINGSPQNTFVPGLIDLAI+RN LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGILY PGEHP
Sbjct:  162 DLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQVQQIIKDMRDFKEQNKVDKVVVLWTANTERYSNVVVGLNDTAESLMASVERNEAEISPSTLYAIACVFENVPFINGSPQNTFVPGLIDLAIQRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILYEPGEHP 380          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 399.438 bits (1025), Expect = 8.830e-111
Identity = 196/219 (89.50%), Postives = 211/219 (96.35%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYME MVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ ++IKDIREFKEKNKVD+VVVLWT NTERYSNV+VGLNDT+ENLLASL+KNE+EISPST YA+AC+ ENIPFINGSPQNTFVPGLIDLAI++N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGILY PGEHP
Sbjct:  164 DLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQVERVIKDIREFKEKNKVDKVVVLWTGNTERYSNVVVGLNDTMENLLASLEKNESEISPSTSYALACIEENIPFINGSPQNTFVPGLIDLAIKKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILYEPGEHP 382          
BLAST of CX295248 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 1.506e-110
Identity = 196/219 (89.50%), Postives = 213/219 (97.26%), Query Frame = 3
Query:   24 EVQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHP 680
            ++QKQLRPYME MVPLPGIYD DFIAANQGSRAN+VIKGTKKEQ+ QIIKD+REFKEKNKVD++VVLWTANTERYS+V+VGLNDT+ENLLAS++KNE+EISPSTLYAIACVLE IPFINGSPQNTFVPGLI+LAI +NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHP
Sbjct:  162 DLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANSVIKGTKKEQVDQIIKDMREFKEKNKVDKLVVLWTANTERYSDVVVGLNDTMENLLASVEKNESEISPSTLYAIACVLEGIPFINGSPQNTFVPGLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHP 380          
The following BLAST results are available for this feature:
BLAST of CX295248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_TOBAC1.455e-11392.24Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_NICPA3.242e-11391.78Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_CITPA5.531e-11396.26Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_HORVU9.434e-11391.78Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_ORYSJ1.232e-11292.69Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO3_ARATH6.115e-11289.50Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_MAIZE6.115e-11290.41Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_SESIN5.177e-11189.50Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_MESCR8.830e-11189.50Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_WHEAT1.506e-11089.50Inositol-3-phosphate synthase OS=Triticum aestivum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05070C02SK PhIFruit1 Citrus clementina cDNA clone C05070C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295248 ID=CX295248; Name=CX295248; organism=Citrus clementina; type=EST; length=681bp
AGGCCTCGTGCCGAATTCGGCACGAGGTTCAAAAGCAACTTAGGCCTTAC
ATGGAATCAATGGTCCCACTTCCTGGAATCTATGACCTTGATTTCATTGC
TGCCAATCAAGGGTCCCGTGCCAACAACGTGATCAAAGGAACCAAGAAAG
AACAAATGCTACAAATCATCAAAGATATTAGAGAGTTTAAGGAGAAAAAC
AAGGTGGATAGGGTTGTTGTACTGTGGACTGCTAACACTGAGAGGTACAG
TAATGTGATTGTTGGGCTAAATGACACAGTGGAGAACCTTCTTGCTTCAC
TGGACAAAAACGAAGCTGAGATTTCTCCTTCCACCTTGTATGCTATTGCT
TGTGTTCTTGAAAATATCCCTTTCATCAATGGAAGCCCCCAAAACACCTT
TGTACCAGGGCTTATTGACTTGGCTATTAGGAGGAACTGTTTGATTGGTG
GAGATGACTTCAAGAGTGGGCAGACTAAGATGAAATCTGTTTTGGTTGAT
TTCCTTGTTGGGGCAGGAATCAAGCCAACATCAATTGTTAGCTACAACCA
CTTGGGAAACAATGATGGAATGAATCTTTCAGCCCCTCAAACCTTCCGCT
CCAAGGAGATTTCCAAAAGTAATGTTGTTGATGACATGGTCTCCAGCAAT
GGTATCCTTTATGGGCCTGGTGAACACCCCG
back to top