CX295251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 3.945e-88 Identity = 166/240 (69.17%), Postives = 183/240 (76.25%), Query Frame = 2 Query: 29 MASMVSTNCAQFSGLRRSSPT---------QSFSQHVNXXXXXXXXXXXXXXXX--VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 MA+ T FSGLRR SP QSF VN VVAMA S KFFVGGNWKCNGTK+SI KL+SDLN A LE FVYIDQVK+SLTDRI+I+ QNSWVGKGGAFTGEISVEQLKD+GCKWV+LGHSERRHVIGE D+FIGKKAAYALSEGLGVIACIGE+L+EREAGKTFDVCF QLKA+ADA+PSWDN+V+AYEPVWAIGTGKVA+P+Q Sbjct: 1 MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQ 240
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.165e-86 Identity = 164/235 (69.79%), Postives = 185/235 (78.72%), Query Frame = 2 Query: 35 SMVSTNCAQFSGLRRS--------SPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 S VST QFSGLRRS S SF Q+V+ VVAMA S KFFVGGNWKCNGTKESITKLVSDLN A LE FVYIDQVK+SLT R+EI+AQN W+GKGGAFTGEISVEQLKD+GC+WV+LGHSERRHVIGE ++FIGKKAAYAL++G+GVIACIGE L+EREAGKTFDVC+QQLKA+ADA+PSWDNVV+AYEPVWAIGTGKVA+P+Q Sbjct: 17 SAVST---QFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSSSRRCPRG-VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQ 247
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 6.298e-86 Identity = 155/218 (71.10%), Postives = 176/218 (80.73%), Query Frame = 2 Query: 62 FSGLRRSSPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 +SGLRRS P S VVAMA + KFFVGGNWKCNGTK+ I+KLVSDLN AKLE F+Y+DQVK+SLTDRIEI+ QNSWV KGGAFTGEISVEQLKDIG KWV+LGHSERRHVIGEDDQFIGKKAAYAL+EGLGVIACIGE+L+EREAGKTFDVC++QLKA+ADA+PSW+N+V+AYEPVWAIGTGKVA+P+Q Sbjct: 22 YSGLRRSCPKLDQSHSSLFQHLSLSSSSRKASRAVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQVKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQ 239
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 7.967e-81 Identity = 143/184 (77.72%), Postives = 161/184 (87.50%), Query Frame = 2 Query: 164 VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 +VAMA S KFFVGGNWKCNGTKESI+KLVSDLN A LE F+YIDQVK+SLTDRIE++AQN+W+GKGGAFTGEIS EQL DIGC+WV+LGHSERRHVIGEDD+FIGKKAAYALS+ L V+ACIGE L+EREAGKTFDVCF+Q+KA+AD I W NVVIAYEPVWAIGTGKVA+PEQ Sbjct: 40 LVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQ 223
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.946e-59 Identity = 109/179 (60.89%), Postives = 136/179 (75.98%), Query Frame = 2 Query: 188 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD-AIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 KFFVGGNWKCNGT+ES++K+V LN+ + +V++ L I++AAQN WV KGGAFTGE+S + L ++G WV+LGHSERR ++GE ++F+GKKAAYA SEGLGVIACIGE L+EREAGKTFDVCF+QLK++A WDNVV+AYEPVWAIGTGKVA+PEQ Sbjct: 4 KFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQ 182
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 1.673e-54 Identity = 100/178 (56.18%), Postives = 126/178 (70.79%), Query Frame = 2 Query: 188 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 KFFVGGNWKCNGT + + K+V LN+ ++ +V++ VK+ L +AAQN WV KGGAFTGE+S E L ++G WV+LGHSERR ++GE ++F+G K AYALS+GL VIAC+GE L++REAG T DV Q KA A+ I W NVV+AYEPVWAIGTGKVATP Q Sbjct: 4 KFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQ 181
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.727e-54 Identity = 105/181 (58.01%), Postives = 124/181 (68.51%), Query Frame = 2 Query: 173 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+Q Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQ 181
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.727e-54 Identity = 105/181 (58.01%), Postives = 124/181 (68.51%), Query Frame = 2 Query: 173 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+Q Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQ 181
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.727e-54 Identity = 105/181 (58.01%), Postives = 124/181 (68.51%), Query Frame = 2 Query: 173 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+Q Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQ 181
BLAST of CX295251 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.867e-54 Identity = 100/178 (56.18%), Postives = 125/178 (70.22%), Query Frame = 2 Query: 188 KFFVGGNWKCNGTKESITKLVSDLN--DAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 715 KFFVGGNWKCNGT E + K+++ LN D + +V++ VKN L +AAQN WV KGGAFTGE+S E L ++ WV+LGHSERR ++GE ++F+G K AYALS+GL VIAC+GE L+ERE+G T DV Q KA AD + W NVV+AYEPVWAIGTGKVA+P Q Sbjct: 4 KFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAIGTGKVASPAQ 181 The following BLAST results are available for this feature:
BLAST of CX295251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295251 ID=CX295251; Name=CX295251; organism=Citrus clementina; type=EST; length=715bpback to top |