CX295315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295315 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.960e-45 Identity = 96/195 (49.23%), Postives = 116/195 (59.49%), Query Frame = 2 Query: 2 IKSIVAASSYPLSIVLVGVGDGPWEDMQKFDDKIPAREFDNFQFVNFTAIMSKNATPSEKETAFALAALMEIPIQYKAAVELGIMGRTTGXXXXXXXXXXXXXXXXXXXXERQPSR------------------GSTPV-------AETQACPICLTNAKDLAFGCGHMTCRECGSRVSNCPICRQRITNRLRLF 511 + +IV AS PLSIVLVGVGDGPW+ M++FDD IPAR FDNFQFVNFT IM+KN S KET FAL+ALMEIP QYKA +EL ++GR G +PSR S+PV ++ Q CPICL+N KD+AFGCGH TC ECG + CPICR I R++L+ Sbjct: 274 VDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMAKNKAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRGGSSSYNSPKPSRLPSFKPSVPPHPTEGYHVRSSPVPPPTSSASDNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
BLAST of CX295315 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.090e-45 Identity = 93/182 (51.10%), Postives = 112/182 (61.54%), Query Frame = 2 Query: 2 IKSIVAASSYPLSIVLVGVGDGPWEDMQKFDDKIPAREFDNFQFVNFTAIMSKNATPSEKETAFALAALMEIPIQYKAAVELGIMGRTTGXXXXXXXXXXXXXXXXXXXXERQP------------SRGSTPVAETQACPICLTNAKDLAFGCGHMTCRECGSRVSNCPICRQRITNRLRLF 511 + +IV AS+ PLSIVLVGVGDGPW+ MQ+FDD IPAR FDNFQFVNFT IMSKN S KET FAL+ALMEIP QYKA +EL ++G G R P S+ + + Q CPICL+N K++AFGCGH TC ECG + CPICR I R++L+ Sbjct: 308 VDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQFVNFTEIMSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPVQSGSSFSSSRIPNFEPSVPPYPFESKQMSSADDIQLCPICLSNPKNMAFGCGHQTCCECGPDLKVCPICRAPIQTRIKLY 489
BLAST of CX295315 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 5 KSIVAASSYPLSIVLVGVGDGPWEDMQKFDDKIPAREFDNFQFVNFTAIMSKNATPSEKETAFALAALMEIPIQYKAAVELGIM 256 K+I AAS YPLSI++VGVGDGPW M +FDD IP R FDNF FV+F +M + +FAL ALMEIP QYKA ELG++ Sbjct: 7462 KAIAAASHYPLSIIMVGVGDGPWNMMGRFDDNIPKRLFDNFHFVDFHKVM---FNAPNADASFALNALMEIPDQYKAIKELGLL 7542 The following BLAST results are available for this feature:
BLAST of CX295315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295315 ID=CX295315; Name=CX295315; organism=Citrus clementina; type=EST; length=707bpback to top |