CX295320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295320 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 76/210 (36.19%), Postives = 106/210 (50.48%), Query Frame = 3 Query: 102 AQTCNLLSQYFKENGRF-------ASKPAANQGNESDSRQQATTMNLLPNLENSAEISKQDVKANDFFANIPSLAASN-------------VMNEAISGQGTSQMTIFYAGKVFVFSDFPAEKAKEIMALATK-----------------AASSNVIPDLNMASTFRNNNNDATPL-QFP---SASLQRFFDKRKERAAARAPYQVKNPS 608 +QTC+ LSQY KENG F A KP N G +SRQ TTM+L P ++ + QDVK + F PS ++S+ T+ +TIFYAG+V VF+DF AEKAKE++ LA+K A +N +P +T + TPL + P ASL RF +KRK+R ++APYQ+ +P+ Sbjct: 24 SQTCSRLSQYLKENGSFGDLSLGMACKPDVN-GTLGNSRQPTTTMSLFPCEASNMDSMVQDVKPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTSKAPYQLCDPA 232
BLAST of CX295320 vs. ExPASy Swiss-Prot
Match: TI11B_ARATH (Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17 Identity = 73/211 (34.60%), Postives = 96/211 (45.50%), Query Frame = 3 Query: 102 AQTCNLLSQYFKENGRF-------ASKPAANQGNESDSRQQATTMNLLPNLENSA----------EISKQDVKANDFFANIPSLAASNVMNEAISGQGTSQMTIFYAGKVFVFSDFPAEKAKEIMALATKA-----------------ASSNVIPDLNMASTFRNNNNDATPLQFP-------SASLQRFFDKRKERAAARAPYQVKNPSS 611 +Q C+LLS+Y KE G F A K + D + Q N++ +E S I + D I + V E+ G SQ+TIF+ GKV VF++FP +KAKEIM +A +A S+ VIPDLN ++ NN + T Q ASL RFF KRK+RA ARAPYQV S Sbjct: 13 SQRCSLLSRYLKEKGSFGNINMGLARKSDLELAGKFDLKGQ---QNVIKKVETSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPES----GNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKEANHVAVDSKNSQSHMNLDKSNVVIPDLNEPTSSGNNEDQETGQQHQVVERIARRASLHRFFAKRKDRAVARAPYQVNQHGS 216
BLAST of CX295320 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14 Identity = 69/223 (30.94%), Postives = 98/223 (43.95%), Query Frame = 3 Query: 102 AQTCNLLSQYFKENGRFAS-------KPAANQGNESDSRQQATTMNLLP----NLENSAEISKQDVKANDFFANIPSLAASN----------VMNEAISGQGTSQ---MTIFYAGKVFVFSDFPAEKAKEIMALATKAASSNVIPDLNMASTFRNNNNDA------------------TPLQFP----------------SASLQRFFDKRKERAAARAPYQV 596 +QTC LS+Y KE G F KP N G+ +Q T MNL P +++SA ++D+K F S ++S+ + S + SQ +TIFY G+V VF DF AEKAKE++ LA K ++ + + NNN+ A T Q P ASL RF +KRK+R ++APYQ+ Sbjct: 19 SQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGS-----RQPTMMNLFPCEASGMDSSA--GQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKS----FTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKTAAQEPIQPNPASLACELPIARRASLHRFLEKRKDRITSKAPYQI 230
BLAST of CX295320 vs. ExPASy Swiss-Prot
Match: TI11A_ARATH (Protein TIFY 11A OS=Arabidopsis thaliana GN=TIFY11A PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 67/197 (34.01%), Postives = 91/197 (46.19%), Query Frame = 3 Query: 111 CNLLSQYFKENGRFASKPAANQGNESDSRQQATTMNLLPNLENS---AEISKQDVKANDFFANIPSLAASNVMNEAISGQGTSQMTIFYAGKVFVFSDFPAEKAKEIMALATKA-------------------ASSNVIPDLNMASTFRNNNNDATPLQFPS-------------ASLQRFFDKRKERAAARAPYQV 596 C+LLS+Y KE G F + + DS P +N+ A SK + + +V + + S G+SQ+TIF+ GKV V+++FP +KAKEIM +A +A SS V+PDLN + +NN T Q ASL RFF KRK+RA ARAPYQV Sbjct: 22 CSLLSRYLKEKGSFGNIDLGLY-RKPDSSLALPGKFDPPGKQNAMHKAGHSKGEPSTSS------GGKVKDVADLSESQPGSSQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKPVTEINIQTPINDENNNNKSSMVLPDLNEPT----DNNHLTKEQQQQQEQNQIVERIARRASLHRFFAKRKDRAVARAPYQV 207 The following BLAST results are available for this feature:
BLAST of CX295320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295320 ID=CX295320; Name=CX295320; organism=Citrus clementina; type=EST; length=701bpback to top |