CX295321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY11_SOLTU (Cytochrome c1-1, heme protein, mitochondrial OS=Solanum tuberosum GN=CYCL PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLDVVN 255 IA+PKML DGA+EYEDG PATEAQMGKDVV+FLSWAAEPEMEERKLMGFKWIFVLSLALLQA YYRRLRWSVLKSRKLVLDVVN Sbjct: 237 IAMPKMLNDGAVEYEDGIPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 320
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY12_SOLTU (Cytochrome c1-2, heme protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=CYCL PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.394e-38 Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLDVVN 255 IA+PKML DGA+EYEDG PATEAQMGKDVV+FL+WAAEPEMEERKLMGFKWIFVLSLALLQA YYRRLRWSVLKSRKLVLDVVN Sbjct: 177 IAMPKMLNDGAVEYEDGVPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 260
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_NEUCR (Cytochrome c1, heme protein, mitochondrial OS=Neurospora crassa GN=cyt-1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20 Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 1 GIALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLD 246 GIA+ ++L DG ++YEDGTPA+ +QM KDVV FL+WAAEPEM++RK MG K + V S+ + Y +R +W+ LKSRK+V D Sbjct: 231 GIAMARVLYDGLVDYEDGTPASTSQMAKDVVEFLNWAAEPEMDDRKRMGMKVLVVTSVLFALSVYVKRYKWAWLKSRKIVYD 312
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_YEAST (Cytochrome c1, heme protein, mitochondrial OS=Saccharomyces cerevisiae GN=CTC1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.313e-17 Identity = 39/81 (48.15%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLD 246 IA+ ++L D +EYEDGTPAT +QM KDV TFL+W AEPE +ERK +G K + +LS L + + ++ +W+ +K+RK V + Sbjct: 223 IAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFN 303
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_SCHPO (Cytochrome c1, heme protein, mitochondrial OS=Schizosaccharomyces pombe GN=cyt1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17 Identity = 40/78 (51.28%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 237 IA+ + L D A+E+EDGTPAT AQ KDVV FL WA+EPE++ RK MGF+ I VL++ + +Y+R +W+ +K+RK+ Sbjct: 223 IAMARPLFDDAVEFEDGTPATTAQAAKDVVNFLHWASEPELDIRKKMGFQVITVLTILTALSMWYKRFKWTPIKNRKI 300
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_KLULA (Cytochrome c1, heme protein, mitochondrial OS=Kluyveromyces lactis GN=CYT1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17 Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLD 246 IA+ ++L D +EYEDGTPAT +QM KDV TFL W +EPE +ERK +G K + VLS L + + ++ +W+ +KSRK+V + Sbjct: 208 IAMGRVLFDDLVEYEDGTPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIVLSSLYLLSVWVKKFKWASIKSRKIVFN 288
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_DICDI (Cytochrome c1, heme protein, mitochondrial OS=Dictyostelium discoideum GN=cyc1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.388e-15 Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 237 IA+ L DG +EY+DGT + +QM KDV TFL WA+EPE ++RK +G K + +S+ L Y++RL+WSV+K+RK+ Sbjct: 194 IAMAPPLADGMVEYDDGTDNSMSQMAKDVSTFLCWASEPEHDDRKKLGMKVLLGVSIIALPLFYWKRLKWSVIKTRKI 271
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_MOUSE (Cytochrome c1, heme protein, mitochondrial OS=Mus musculus GN=Cyc1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 37 LEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 237 LEY+DGTPAT +Q+ KDV TFL WA+EPE + RK MG K + ++ L L +R +WSVLKSRKL Sbjct: 253 LEYDDGTPATMSQVAKDVATFLRWASEPEHDHRKRMGLKMLLMMGLLLPLTYAMKRHKWSVLKSRKL 319
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_BOVIN (Cytochrome c1, heme protein, mitochondrial OS=Bos taurus GN=CYC1 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 237 I + + + LE++DGTPAT +Q+ KDV TFL WAAEPE + RK MG K + ++ L L +R +WSVLKSRKL Sbjct: 242 IGMAPPIYNEVLEFDDGTPATMSQVAKDVCTFLRWAAEPEHDHRKRMGLKMLLMMGLLLPLVYAMKRHKWSVLKSRKL 319
BLAST of CX295321 vs. ExPASy Swiss-Prot
Match: CY1_HUMAN (Cytochrome c1, heme protein, mitochondrial OS=Homo sapiens GN=CYC1 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.617e-14 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 4 IALPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 237 IA+ + LE++DGTPAT +Q+ KDV TFL WA+EPE + RK MG K + +++L + +R +WSVLKSRKL Sbjct: 242 IAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKL 319 The following BLAST results are available for this feature:
BLAST of CX295321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295321 ID=CX295321; Name=CX295321; organism=Citrus clementina; type=EST; length=589bpback to top |