CX295387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_YEAST (Mitochondrial Rho GTPase 1 OS=Saccharomyces cerevisiae GN=GEM1 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 79/231 (34.20%), Postives = 132/231 (57.14%), Query Frame = 1 Query: 49 GGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSSAIRVTRKRRIDRKKQQA------ERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLDSFAMAIQ-DSIRVSQDMGIEAPIPVSSK-LGEFNIIFPEIVQA 717 G ++L G+L++W++ T L+ + + L+Y G+ D A++VT+ R++ R+ + +R VF CFV G GKS+LL +FLGR FS+ Y+PT R AVN ++ GG + ++L+E+ E+ A +L NKD L CD+ +DSSD S+ LL + +H +D +P + VA+K DLD Q ++ ++ + P+ +SS+ L N +F +I +A Sbjct: 384 GCITLQGWLAQWSMTTFLNYSTTTAYLVYFGFQEDARLALQVTKPRKMRRRSGKLYRSNINDRKVFNCFVIGKPCCGKSSLLEAFLGRSFSEEYSPTIKPRIAVNSLELKGGKQYYLILQELGEQEYA-ILENKDKLKECDVICLTYDSSDPESFSYLVSLL-DKFTHLQD----LPLVFVASKADLDKQQQRCQIQPDELADELFVNHPLHISSRWLSSLNELFIKITEA 608
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_CRYNE (Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans GN=GEM1 PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.182e-29 Identity = 81/249 (32.53%), Postives = 133/249 (53.41%), Query Frame = 1 Query: 19 YKDAAEKTALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSS------AIRVTRKRRIDRKKQQAERNVFQCFVFGPKKAGKSALLNSFLGRPFS------DNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLDSFAMAIQDSIRVSQD-----MGIEAPIPVSSKLGEFNIIFPEIVQ 714 + D +G ++L G+L++W++ TLL+ ++ L Y+GY P++ A+ VTR R+ DR++++ RNVF C+V G +GK++LL SF+ RPF Y PTT VN V+ G +K +VL+E + +++L N L DI ++VHDSSD +S+ + L + + +P + VA K DLD Q V D +G++AP+ VSS+LG + ++ I + Sbjct: 383 FPDTTITDDMGRVTLQGWLAQWSMTTLLNHRTTLNYLAYLGYSSSPATDLPTPTALHVTRPRKQDRRQRKVTRNVFLCYVLGATGSGKTSLLRSFVNRPFKGGEDGLGGYEPTTKVLSVVNSVEME-GVEKYLVLQEFGSKYESEILRNSKRLDMADIIIYVHDSSDTNSFSYISNLRQQYSLD------HIPSIFVATKSDLD----LAQQRHEVQPDVYCRRLGLQAPMAVSSRLGPLHNLWVAITR 620
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_CANGA (Mitochondrial Rho GTPase 1 OS=Candida glabrata GN=GEM1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.182e-29 Identity = 80/233 (34.33%), Postives = 127/233 (54.51%), Query Frame = 1 Query: 43 ALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSSAIRVTRKRRIDRKKQQ------AERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLDSFAMAIQ-DSIRVSQDMGIEAPIPVSSK-LGEFNIIFPEIVQA 717 A G ++L G+L++W + T LD + L+Y+G+ D A+++T+ RR+ R++ + +R VF CFV G + +GKS+LL SFLGR FS+ Y+PT R AVN V+ G + ++L+E E+ A +L N LA CD+ +DSSD S+ ELL + ++P + VA K DLD + + + ++ P+ VSS N +F +I+QA Sbjct: 372 AKGFVTLQGWLAQWTMTTYLDYKITTAYLVYLGFQEDAKLAVQITKSRRMRRRQGRLYRSYVTDRKVFNCFVVGKRNSGKSSLLESFLGRLFSEAYSPTIRPRVAVNNVEVTGDKQYYLILQEFGEQEEA-ILQNPSRLAECDVLCLTYDSSDPESFSYLLELLT-----NNEIMKDIPVVFVALKADLDKQQQRCKFQPDEFTDTLYLDHPLHVSSTWSSSLNQLFKKIIQA 598
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_GIBZE (Mitochondrial Rho GTPase 1 OS=Gibberella zeae GN=GEM1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.345e-27 Identity = 74/233 (31.76%), Postives = 125/233 (53.65%), Query Frame = 1 Query: 19 YKDAAEKTALGGLSLDGFLSEWALMTLLDPARSVENLIYIGY-PGDP----SSAIRVTRKRRIDRKKQQAERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLDSFAMAIQ-DSIRVSQDMGIEAPIPVSSKLGEFNIIF 699 + + + G ++L G+L++W++ T ++P ++E L Y+G+ P +P ++A+++T+ R+ + + ERNV C+V G AGKSALL+SFL RPF Y PT R AVN V+ PGG + ++L E+ E A +L N+ L ACD+ + +DSSD S+ +L + E+P + A K D D + + + + + P+ VS G + +F Sbjct: 349 FPSSTVRNEAGHVTLQGWLAQWSMTTFIEPKTTIEYLAYLGFEPSNPKDSITAALKITKPRKRRSRLGRVERNVVLCYVLGASGAGKSALLDSFLNRPFYGLYHPTIKPRRAVNSVELPGGKQVYLILEELGELEPA-ILENRAKLDACDLICYAYDSSDPDSFSHIVDLRKKYPHLD-----ELPSIYTALKADKDKTNQRCELQPDQYTSSLSMSLPLHVSVTWGSISELF 575
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_CANAL (Mitochondrial Rho GTPase 1 OS=Candida albicans GN=GEM1 PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26 Identity = 78/215 (36.28%), Postives = 119/215 (55.35%), Query Frame = 1 Query: 49 GGLSLDGFLSEWALMTLLDPARSVENLIYIGYP-GDPSSAIRVTRKRRIDRKKQQA------ERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLDSFAMAIQ-DSIRVSQDMGIEAPIPVS 669 G ++L G+L++W L T L ++E L Y+G+ G+ + A++VT+ R+I +K + +RNVF CF+ G KAGKS+LL SFL +SD Y+PT R V ++ GG + ++L E+ E A +L NK L CD+ + +DSSD S++ EL E H D EVP + VA K DLD ++D+ + +P+ VS Sbjct: 370 GYVTLQGWLAQWNLTTFLSYKTTLEYLAYLGFDEGNSTKALKVTKPRKIRQKNGKTYRNAVNDRNVFNCFIVGAPKAGKSSLLESFLHGSYSDIYSPTIQPRLVVKDIELRGGKQCYLILEELGELEPA-ILENKSRLDQCDVICYAYDSSDPESFQYLVELR-EKHGHLLD---EVPAVFVALKADLDKQQQRCDVQPENYTRDLFLNSPLHVS 579
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_ASHGO (Mitochondrial Rho GTPase 1 OS=Ashbya gossypii GN=GEM1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26 Identity = 67/188 (35.64%), Postives = 105/188 (55.85%), Query Frame = 1 Query: 49 GGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSSAIRVTRKRRIDRKK------QQAERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLD 594 G ++L G+L+ W++ T +D + E L+Y+G+ D A+ VTR RR R+ +R VF C++ G +GKS+LL SFLGRPFS+ Y+PT + AVN ++ GG + ++L+E ++ A +L N+ + CD+ +DSSD S+ LV H + +P + VA K DLD Sbjct: 381 GFITLQGWLAHWSMTTFIDYKTTTEYLVYLGFEKDAKLALHVTRARRKRRRNGIFYRAPVNDRKVFNCYILGKPNSGKSSLLESFLGRPFSETYSPTIRPKIAVNSLELKGGKQYYLILQEFGQQEPA-ILENQQKVMECDVLCLAYDSSDPESFSYLVN-LVNRYQHLK----ALPMVFVALKADLD 562
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_NEUCR (Mitochondrial Rho GTPase 1 OS=Neurospora crassa GN=gem-1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 71/241 (29.46%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 13 TPYKDAAEKTALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGD-----PSSAIRVTRKRRIDRKKQQAERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLDSFAMAIQ-DSIRVSQDMGIEAPIPVSSKLGEFNIIFPEIVQA 717 T + + G ++L G+L++W++ T L+P ++E L Y+G+ ++A+++T+ R+ R+ + +RNV C++ G AGKS+LL+ FL RPF Y PT R AVN V+ GG + ++L E+ E A +L N+ L ACD+ + +DSS+ S+ EL E+P + A K D D + + + + AP+ VS + +F + +A Sbjct: 348 TSFPSTTVRNEAGHITLQGWLAQWSMTTFLEPKTTLEYLAYLGFETPNARETTTAALKITKPRKRRRRPGRVDRNVVLCYILGSSGAGKSSLLDVFLNRPFDTLYHPTIKPRQAVNSVELQGGKQCYLILEELGELEPA-ILENQAKLDACDLICYAYDSSEPDSFSHIVELRKRYPQLD-----ELPAVYTALKADRDKTTQRSELQPDAYTAALNMSAPLHVSVTWNSISELFVALAEA 582
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: MIRO2_CHICK (Mitochondrial Rho GTPase 2 OS=Gallus gallus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 74/190 (38.95%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 40 TALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYP-----GDPSSAIRVTRKRRIDRKKQQAERNVFQCFVFGPKKAGKSALLNSFLGRPF-SDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDL 591 T G LSL GFL +W L+ LD +E L Y+GYP + A+ VTR++RID +K Q +RNVF C V G + AGKSA L +FLGR + +P Y +N V Q G +K ++L E+ A+ K S AACD+A ++D SD S+ + + H D+ ++PC+ VA+K DL Sbjct: 352 TDKGLLSLHGFLCQWTLIAYLDVRHCLECLGYLGYPILSEQDSQTQALTVTREKRIDLEKGQTQRNVFLCKVLGARGAGKSAFLQAFLGRSLAAQRESPGEPSPYTINTV-QVNGQEKYLILHEVS----AETQFTKPSDAACDVACLIYDLSDPKSFSYCASIYKQ---HYMDS--QIPCVFVASKTDL 531
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_ASPOR (Mitochondrial Rho GTPase 1 OS=Aspergillus oryzae GN=gem1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24 Identity = 71/198 (35.86%), Postives = 107/198 (54.04%), Query Frame = 1 Query: 19 YKDAAEKTALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSS------AIRVTRKRRIDRKKQQAERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLD 594 + + + G ++L G+L++W++ T P ++E L Y+G+ S A++VTR R+ ++ + RNV V GP +GKSALL++FL R FS Y PT R AVN V+ PGG + ++L E+ E A L + L CD+ V+ +DSSD S+ EL + H E E+P + VA K DLD Sbjct: 350 FPSSTVRNEAGHVTLQGWLAQWSMTTFTSPKTTLEYLAYLGFESSDRSNPSTTAALKVTRPRKRRKRPGRVGRNVVLGHVLGPPGSGKSALLDAFLARGFSTTYHPTIQPRTAVNTVELPGGKQCYLILDELGELEPAILENQVKLLDQCDVIVYTYDSSDPDSFAYIPELRSKY-PHLE----ELPSVFVALKADLD 542
BLAST of CX295387 vs. ExPASy Swiss-Prot
Match: GEM1_KLULA (Mitochondrial Rho GTPase 1 OS=Kluyveromyces lactis GN=GEM1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24 Identity = 64/186 (34.41%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 55 LSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSSAIRVTRKRRIDRKK------QQAERNVFQCFVFGPKKAGKSALLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASHGEDTGFEVPCLIVAAKDDLD 594 ++L G+L+ W++ T +D + + E LIY+G+ D +A+++T+ RR R+ +R V C++ G +GKS+LL SFLGR FS+ Y+PT + +VN ++ GG + ++L+E+ E+ +L NK L CD+ +DSSD S+ L+ + D E+P + VA K DLD Sbjct: 384 ITLQGWLALWSMTTFIDYSVTTEYLIYLGFDKDAKNALQITKPRRKRRRNGVYYRAPVFDRKVLNCYMLGKGNSGKSSLLESFLGRSFSEAYSPTIRPKISVNSLELKGGKQYYLILQELGEQE-TPILENKGKLDECDVLCLCYDSSDPESFSYIVSLIDKF-----DYLKELPIVFVALKADLD 563 The following BLAST results are available for this feature:
BLAST of CX295387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295387 ID=CX295387; Name=CX295387; organism=Citrus clementina; type=EST; length=717bpback to top |