CX295428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: LEUNG_ARATH (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 4.132e-64 Identity = 115/222 (51.80%), Postives = 159/222 (71.62%), Query Frame = 1 Query: 64 GDAVAMSGSMQHVSNVPKGLMMYGSDGTGGHASSTNQLDDMEHFGDIGSLDDNVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI 729 GD ++M ++ H K +MM+G++GTG S +NQL DM+ F + GSLDDNVESFLSQ+DGD RD + + SK F+F EV+S+R S++KVTCCHFSSDGK+LASAGHDKK V+W + + + T ++H +ITD+RF P+ +LATSSFDKTVR+WDA + L+T+ GH++ V SLDFHP K+DL CSCD ++EIR+W+++ SC R+ Sbjct: 562 GDVISMP-NLPHSGGSSKSMMMFGTEGTGTLTSPSNQLADMDRFVEDGSLDDNVESFLSQEDGDQRDAV--------TRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRV 774
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: YY46_ANASP (Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15 Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 358 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 720 +S V F+ DG LAS D+ V +W + + + CT H + V F P+ + LA+ S DKTVR+WD + CL T+ GH N V S+ F+P + S G+ +R W +S C Sbjct: 1200 TSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSK-CLHTFQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEISSSKC 1318 HSP 2 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 44/135 (32.59%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 316 KAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 720 +A + E+ + + +S V FS DGK+LAS D+ V +W++ + Q T H + V F PNS LA+ S D+TVR+WD + CL + GH V S+ F+ + + G+ +R W++S C Sbjct: 892 EAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGE-CLYIFQGHTGWVYSVAFN-LDGSMLATGSGDQTVRLWDISSSQC 1024 HSP 3 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 44/149 (29.53%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 274 TLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 720 TL S+Q + S + + + +S V F+ DG +LAS DK V +W++ + + T H + + V F P+ + LA+ S D+TVR+W+ + CL T+ GH + V S+ F P + S + +R W++S C Sbjct: 1214 TLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSK-CLHTFQGHTSWVSSVTFSP-DGTMLASGSDDQTVRLWSISSGEC 1360 HSP 4 Score: 72.7886 bits (177), Expect = 2.152e-12 Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 358 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 720 +S V+ FS DG +LAS D+ V +W++ + + T H + + V F P+ LA+ S D+TVR+W + CL T GHNN V S+ F P L S + +R WN+S C Sbjct: 1326 TSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGK-CLYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISSGEC 1444 HSP 5 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 44/135 (32.59%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 325 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI 729 S N + +++ +S V FS DG +LAS G D+ V +W++ + T + + + F PN LA S D+ VR+WD + CL T GH N V ++ F P L S G+ +R W++S C I Sbjct: 1063 SGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKK-CLYTLQGHTNWVNAVAFSPDGATL-ASGSGDQTVRLWDISSSKCLYI 1195 HSP 6 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 42/149 (28.19%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 274 TLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 720 TL S+Q S + +++ ++ V FS DG LAS D+ V +W++ + + H + V F P+ + LA+ S D+TVR+W+ + CL T+ GH + V S+ F+P + S + +R W++S C Sbjct: 1130 TLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWE-INSSKCLCTFQGHTSWVNSVVFNP-DGSMLASGSSDKTVRLWDISSSKC 1276
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 349 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 R S+ V FS DG++LAS G D+ V +W++ + T H H + V F P+ LA++S DKT+++WD + CLQT TGH + V + F P N L S + I+ W++SQ C R Sbjct: 681 RGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWD-IQDGTCLQTLTGHTDWVRCVAFSPDGNTL-ASSAADHTIKLWDVSQGKCLR 804 HSP 2 Score: 73.1738 bits (178), Expect = 1.648e-12 Identity = 42/148 (28.38%), Postives = 70/148 (47.30%), Query Frame = 1 Query: 292 SEQATETSKAFSFNEVSSIRKSSSK---VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 S A T K + ++ +R S V FS+DG+ LAS D+ + +WN + T H + + + + P+S L + S D+T+++WD + + C++T GH N V S+ F P L C + +R WN C + Sbjct: 785 SSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWD-CQTHICIKTLHGHTNEVCSVAFSPDGQTLAC-VSLDQSVRLWNCRTGQCLK 930 HSP 3 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 39/131 (29.77%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 337 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI 729 V +R S++V FS +G+++A+ D+ V +W+ + + T H + + D+ F P+ LA++S D+TVRIWD C GH + V S+ F P ++ S + +R WN+ C +I Sbjct: 1097 VGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWD-VNTGKCHHICIGHTHLVSSVAFSP-DGEVVASGSQDQTVRIWNVKTGECLQI 1225 HSP 4 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 37/120 (30.83%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 367 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 V C FS DG LAS+ D + +W++ + T H + V F + LA+ S D+T++IW+ CL+TY GH N V S+ + P + + S G+ I+ W+ + C + Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWN-YHTGECLKTYIGHTNSVYSIAYSP-DSKILVSGSGDRTIKLWDCQTHICIK 888
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15 Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 328 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI 729 F+E ++ VTC S + + +A++ D + +W+ F+ ECT H I+ V++ S LA++S DKT+RIWD K ++ GH N+V S+DF+P L S + +R WNL +C R+ Sbjct: 44 FSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEK-RCSVRCLKGHTNYVSSIDFNP-LGTLLVSGSWDETVRIWNLQDGTCLRM 175
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14 Identity = 44/150 (29.33%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 274 TLKRNPSEQATETSKAFSFNEVS-SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 720 +L + SE AT F E +++ ++ V F G LLAS D + +W+ + + T H+H ++ VRF P+ QL +SS DKT+++W+AA +C++T GH + V + + SC + I+ WN+ + C Sbjct: 119 SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA-TGYCIKTLVGHEDWVRKITV-SEDGSCIASCSNDQTIKTWNIVKGEC 266
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 41/134 (30.60%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 325 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 +F ++ + V FS DG LLAS D+ V +W+ T H+ ++DV + PN LAT++ D ++++WD A+ CL+T TGH N+V +F L S + +R W++ C R Sbjct: 29 AFRCTHALSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWD-AETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLR 161
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 40/120 (33.33%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 367 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 V+ FS +G+ LAS+ DK + +W + + E T H I+DV + +S L ++S DKT++IWD + CL+T GH+N+V +F+P+ N L S + +R W++ C + Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLK 165
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 40/120 (33.33%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 367 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 V+ FS +G+ LAS+ DK + +W + + E T H I+DV + +S L ++S DKT++IWD + CL+T GH+N+V +F+P+ N L S + +R W++ C + Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLK 165
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 40/120 (33.33%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 367 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 V+ FS +G+ LAS+ DK + +W + + E T H I+DV + +S L ++S DKT++IWD + CL+T GH+N+V +F+P+ N L S + +R W++ C + Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLK 165
BLAST of CX295428 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 40/120 (33.33%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 367 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 726 V+ FS +G+ LAS+ DK + +W + + E T H I+DV + +S L ++S DKT++IWD + CL+T GH+N+V +F+P+ N L S + +R W++ C + Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLK 165 The following BLAST results are available for this feature:
BLAST of CX295428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295428 ID=CX295428; Name=CX295428; organism=Citrus clementina; type=EST; length=729bpback to top |