CX295611

Overview
NameCX295611
Unique NameCX295611
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4988 contig Ccv1_Contig4988:90..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.882e-66
Identity = 119/226 (52.65%), Postives = 161/226 (71.24%), Query Frame = 3
Query:    6 GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHM 683
            GAW WYKLK  L + GH+VTAVDL+A+GIN +R++++HTF  YSEPLMEV+AS+P +EKV+L+GHS GG++L LA + +P KISVAVF++A MPD  H  ++  E+Y+EK     D  LD+QFS         +SM+ G +F+ +K++Q C  EDLELAKML RPGS+F  +L+K  KFS E YGSVKR Y+ C ED   P +FQ W +++   ++V EIK  DHM
Sbjct:   22 GAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKC--PADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHM 245          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 102/226 (45.13%), Postives = 146/226 (64.60%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 680
            HGAW W+KLK  L A GH+VTA+DLAASG++ ++IE++ +F  YSEPL+  L +LP  EKVILVG S GG+ +A+AADK+  KI+ AVF  + +PDT H PS+V+++  E        W DT +            +  G   L   +Y LC PE+ ELAKML R GS+F + L+K   F+ EGYGS+K++Y+  ++D     +FQ W I+NY  ++V +++GGDH
Sbjct:   14 HGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF----PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDH 235          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 2.871e-48
Identity = 94/227 (41.41%), Postives = 145/227 (63.88%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQ-FSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 680
            HGAW W+KLK  L   GH+VTA+D+AASGI+ ++IE +++F  YSEPL+  L  LP  EKVI+VG S  G+ +A+AAD++  KI+  VF  + +PDT H PS+ +E+  E        W DT+ F+  + +  +  +M  G   L   ++  C   + ELAKM++R GS+F + L++  KF+++GYGS+K+VY+  ++D      FQ W I NY  ++V +++GGDH
Sbjct:   14 HGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESF----PDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDH 236          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.174e-47
Identity = 94/229 (41.05%), Postives = 144/229 (62.88%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHM 683
            HGAWCWY++ A L A GHR TA+D+AA+G +  R ++V +   YS PL++ +A+    E+++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL LA MLVRPG+ +ID+  +  E+  ++  YGSVKRV+LV  +D    ++ Q W I   P  EV E+ G DHM
Sbjct:   16 HGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQRWTIDLSPGVEVEELAGADHM 242          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.174e-47
Identity = 94/229 (41.05%), Postives = 144/229 (62.88%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHM 683
            HGAWCWY++ A L A GHR TA+D+AA+G +  R ++V +   YS PL++ +A+    E+++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL LA MLVRPG+ +ID+  +  E+  ++  YGSVKRV+LV  +D    ++ Q W I   P  EV E+ G DHM
Sbjct:   16 HGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQRWTIDLSPGVEVEELAGADHM 242          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.234e-47
Identity = 97/229 (42.36%), Postives = 142/229 (62.01%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 680
            HGAWCWY++ A L A GHR TA+D+AASG +  R+++V TF  YS PL++ +A+  A  E+++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL LAKMLVRPG+ F+D+  +  ES  ++  YGSVK+VY++ + D    ++ Q WM+   P  +V EI G DH
Sbjct:   19 HGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPE-GLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEMQRWMVAMSPGTDVEEIAGADH 246          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.234e-47
Identity = 97/229 (42.36%), Postives = 142/229 (62.01%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 680
            HGAWCWY++ A L A GHR TA+D+AASG +  R+++V TF  YS PL++ +A+  A  E+++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL LAKMLVRPG+ F+D+  +  ES  ++  YGSVK+VY++ + D    ++ Q WM+   P  +V EI G DH
Sbjct:   19 HGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPE-GLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEMQRWMVAMSPGTDVEEIAGADH 246          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.340e-29
Identity = 76/226 (33.63%), Postives = 118/226 (52.21%), Query Frame = 3
Query:    6 GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF-SQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 680
            GAWCWYK+ A L   G     VDL   G NM     V T   YS+PL+++L +LP EEKVILVGHS GG +++ A ++FP KIS A+FV A M     RP    + +SE++G  +    ++QF    +  +      +F +  +    +   P +D+ LA + +RP  + +  + ++   + E YG  +R Y+   +D  L    Q  +++      V +IKG DH
Sbjct:  107 GAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRP---FDVFSEELGSAERFMKESQFLIYGNGKDKPPTGFMFEKPHMKGLYFNQSPNKDIALAMISMRP--VPLGPMMEKVSLTAERYGKGRRFYVQTLDDRALSPDVQEKLVRENSPEGVFKIKGSDH 327          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 74/228 (32.46%), Postives = 113/228 (49.56%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMG-KEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYG-SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 680
            HGAWCWYKL   LVA G + T+VDL  +GIN+     V  F  Y+ PL  +L+ LP+  K++LVGHS+GG ++  A  KF  KIS+ V++ A M     +P      +   M   E+D W   ++   + ++     +L   EF     Y   P ED+ LA  L+RP    +  L    K S       V RVY+   +D       Q  +++ +P +++  ++  DH
Sbjct:   22 HGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEALCKFTDKISMVVYLAADMV----QPGSTSSTHDSIMTVGEEDIW---EYIYGEGADKPPTGVLMKEEFRRHYYYSQSPLEDVSLASKLLRPAP--VRALGGADKLSPNPEAEKVPRVYIKTAKDNLFDPLRQDRLVEKWPPSQLYILEESDH 240          
BLAST of CX295611 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25
Identity = 74/230 (32.17%), Postives = 114/230 (49.57%), Query Frame = 3
Query:    3 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSM----FIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 680
            HGAWCWYKL   L A G + T+VDL  +GI++     V     Y+ PL  +L+ LP   KVILVGHS+GG ++  A  KF  KIS+A+++ A M      PS      S     E+D W   +++  + ++     +L   EF+    Y   P ED+ L+  L+RP  M     +D L    +        V RVY+   +D       Q  +++N+P +++  ++  DH
Sbjct:   21 HGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMVQPGSIPS---PHLSNIHVGEEDIW---EYTYGEGTDKPPTGVLMKPEFIRHYYYSQSPLEDVTLSSKLLRPAPMRAFQDLDKLPPNPEAE-----KVPRVYIKTAKDNLFDSVRQDLLVENWPPSQLYVLEDSDH 239          
The following BLAST results are available for this feature:
BLAST of CX295611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PNAE_RAUSE8.882e-6652.65Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
HNL_HEVBR7.300e-5245.13Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
HNL_MANES2.871e-4841.41Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
PIR7A_ORYSJ3.174e-4741.05Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI3.174e-4741.05Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
PIR7B_ORYSJ9.234e-4742.36Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI9.234e-4742.36Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
Y1399_ARATH1.340e-2933.63Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_RAPSA3.414e-2532.46Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH9.935e-2532.17Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
back to top
Properties
Property NameValue
Genbank descriptionC05074A08SK DroRLeaf1 Citrus clementina cDNA clone C05074A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295611 ID=CX295611; Name=CX295611; organism=Citrus clementina; type=EST; length=691bp
ACCATGGAGCATGGTGTTGGTACAAACTGAAAGCAAGGCTGGTGGCGGGG
GGTCACCGGGTGACGGCTGTGGACCTAGCCGCCTCGGGCATCAACATGAA
GAGAATTGAGGATGTGCACACATTCCATGCATACAGTGAGCCCTTGATGG
AGGTTTTGGCATCACTTCCTGCCGAAGAAAAGGTCATACTTGTCGGACAC
AGTCTTGGGGGCGTCACTTTGGCCCTTGCCGCCGACAAATTCCCACACAA
AATCTCCGTGGCTGTTTTCGTAACTGCATTCATGCCTGACACCACACACC
GCCCATCTTTTGTTTTGGAGCAGTATTCTGAGAAGATGGGAAAAGAGGAC
GACAGCTGGTTGGACACTCAATTTTCACAATGTGACGCGTCAAATCCATC
TCACATTTCCATGCTTTTCGGCCGCGAGTTCTTGACTATCAAGATCTATC
AGCTTTGTCCTCCTGAGGATCTGGAGCTGGCCAAGATGTTGGTGAGGCCA
GGATCAATGTTTATAGACAACTTATCGAAGGAAAGTAAGTTCAGCGATGA
AGGATACGGATCTGTTAAGCGAGTTTATCTTGTATGCGAAGAGGATATTG
GTCTCCCTAAGCAATTTCAGCACTGGATGATCCAAAACTATCCCGTTAAT
GAAGTGATGGAGATCAAGGGCGGTGATCACATGCAATGCTT
back to top