CX295620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_ARATH (Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.168e-58 Identity = 103/118 (87.29%), Postives = 111/118 (94.07%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 MDPTSRPA+VIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQS+SSSKA W Q+NAGV ADLDF+IGDEA+ KSRSSST+NL YPI HGQV++WDAMERYWQQCIFNYLRCDPE Sbjct: 1 MDPTSRPAIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADLDFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPE 118
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSJ (Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.614e-52 Identity = 92/119 (77.31%), Postives = 109/119 (91.60%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSS-KANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 MD SRPAVVIDNGTGYTKMGFAGNVEPCFI PTVVAVN++F Q+R+++ K NW+AQ++AGVMADLDFFIG++A+ +SRSS+TYNLSYPI +GQV+NWD MER+WQQCIFNYLRCDPE Sbjct: 1 MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPE 119
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 7.614e-52 Identity = 92/119 (77.31%), Postives = 109/119 (91.60%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSS-KANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 MD SRPAVVIDNGTGYTKMGFAGNVEPCFI PTVVAVN++F Q+R+++ K NW+AQ++AGVMADLDFFIG++A+ +SRSS+TYNLSYPI +GQV+NWD MER+WQQCIFNYLRCDPE Sbjct: 1 MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPE 119
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_DICDI (Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 334 MDPTSR-PAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 M+P S PAVVIDNGTGYTKMG+AGN +P FI+PT +A S Q+ +S K + DLDFFIGDEA+ S+ TY+++ P++HGQ++NW ME+YW+ C+F YLRC+PE Sbjct: 1 MNPASGLPAVVIDNGTGYTKMGYAGNNDPSFIIPTTIATQSSKGKQTAASQKKG---------VEDLDFFIGDEAIANSK---TYDMTNPVKHGQIENWTHMEQYWEHCVFKYLRCEPE 107
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_CAEEL (Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 352 PAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 PA VIDNGTGYTK+G+AGN EP FI+P+ +AV + S +S W + AG+ DLDFFIGDEA+ S +++ Y + YPIRHG V++WD MERYW+QCIF YLR +PE Sbjct: 7 PACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVA--SSNSQAMRWNNRVGAGI-DDLDFFIGDEAL--SPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPE 113
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_CAEBR (Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 352 PAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 PA VIDNGTGYTK+G+AGN EP FI+P+ +AV + S ++ W + + DLDFFIGDEA+ S ++S Y + YPIRHG V++WD MERYW+QCIF YLR +PE Sbjct: 7 PACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVA--SSNAQALRWNNRVGGAGIDDLDFFIGDEAL--SPAASNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPE 114
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 M + PAVVIDNGTGYTKMG+AGN EP +I+PT +A + R ++ W +ADLDFFIGDEA S+ Y ++ P+RHGQV+NW ME++W+ CIF YLRC+PE Sbjct: 1 MSRSGLPAVVIDNGTGYTKMGYAGNTEPQYIIPTAIAT-KGIAEDPRCRARRWWCPWAAGKNIADLDFFIGDEAYENSK---VYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPE 114
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_SCHPO (Actin-related protein 3 OS=Schizosaccharomyces pombe GN=act2 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27 Identity = 56/117 (47.86%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 358 VVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRS-SSKANWLAQYNAGVMA------DLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 +++DNGTGY+K+G+AGN P ++ PTV+A + + + SSK +++A +G ++ DLDFFIG++A+ K+ S+ Y+L YPIRHGQ++NWD MER+WQQ +F YLRC+PE Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKA--SAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPE 122
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_YEAST (Actin-related protein 3 OS=Saccharomyces cerevisiae GN=ARP3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23 Identity = 64/145 (44.14%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAV-------------------NE-SFLNQSRSSSKANW-----LAQYNAGVMA--DLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 M + PAVV+DNGTG TK+GFAGN P ++ PT +A NE S+ S S++ N L+ +G DLDF+IG+EA+ S+ S Y+LSYPIRHGQV+NWD MER+W+ IF YLR +PE Sbjct: 1 MSYLNNPAVVMDNGTGLTKLGFAGNDSPSWVFPTAIATAAPSNTKKSSGVGAPSAVSNEASYFGNSTSATNFNGATGGLLSNNLSGKRGTEDLDFYIGNEALVASQGPS-YSLSYPIRHGQVENWDHMERFWENSIFKYLRTEPE 144
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ARP3_NEUCR (Actin-related protein 3 OS=Neurospora crassa GN=arp-3 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23 Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 1 Query: 352 PAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSK----ANWLAQYNAGV-----------MADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 PAVV+DNGTG++K+GFAGN P F+ PT +A S S AN + G DLD+FIGDEAV + Y L YPIRHGQ++NWD MER+W IF YLR +PE Sbjct: 6 PAVVMDNGTGFSKLGFAGNDSPSFVFPTAIATKSPSAGTGGSGSGRPAVANKPSFLTGGAGPGGHLSAKRGTEDLDYFIGDEAVAAANGPG-YGLHYPIRHGQIENWDHMERFWSNSIFKYLRVEPE 131 The following BLAST results are available for this feature:
BLAST of CX295620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295620 ID=CX295620; Name=CX295620; organism=Citrus clementina; type=EST; length=704bpback to top |