CX295628

Overview
NameCX295628
Unique NameCX295628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig661 contig Ccv1_Contig661:1..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 1
Query:  121 GGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK--EKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAI---ATNTNLTQPVFKMVIIGDWVVYRIFQRK 609
            G L+LP G+RF PTD+ELV++YL RK  GLPL A +I E+D+++ +P  LP      EK+ YFFS    +    N  +   AAG+GYWK  G ++ +   G+ + V I+K L+F  GK     KT W+MH+Y L  +   A    L++     + + DWV+ RI+ +K
Sbjct:    5 GALQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFS--PRDRKYPNGQRPNRAAGTGYWKATGADKPV---GSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKK 167          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.874e-26
Identity = 71/196 (36.22%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  127 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK----RGVVSSNNLNITKNSHKNQLQVID 696
            L LP G+RF PTDEELVVHYL RKV   PLP  II E+D+++  P  LP       K+ YFF+    +    N  +   AAG GYWK  G ++ +   G+ + VGI+K L+F  GK     KT W+MH+Y L          +   K   + +WV+ R++ +K   +K    +  V+S      +N H    +V+D
Sbjct:   19 LNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFT--PRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQK---LDEWVLCRLYNKKNNWEKVKLEQQDVASVAAAAPRNHHHQNGEVMD 209          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25
Identity = 64/200 (32.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:  133 LPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILAS--GTKQVVGIRKTLIFCEGKRGHETKTQWVMHQY--------HLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSNNLNITKNSHKNQLQVID 696
            LP G+RF PTDEELV+HYLKRK   +PLP +II ++D+++  P  LP      E++ YFFS    +    N  +   AA SGYWK  G ++ ++++  G  + VG++K L+F  GK     K+ W+MH+Y        H+       N  +       + DWV+ RI+++      R     +++++  + H++ + + D
Sbjct:   17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFS--PRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLR-------LDDWVLCRIYKKNNSTASRHHHHLHHIHLDNDHHRHDMMIDD 207          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.900e-25
Identity = 66/170 (38.82%), Postives = 95/170 (55.88%), Query Frame = 1
Query:  127 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPG--DMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRG 630
            L+LP G+RF PTDEELV+HYL RK     +   II E+D+++  P  LPG     EK+ YFFS    +    N  +   +AGSGYWK  G ++ I   G  + VGI+K L+F  GK     KT W+MH+Y L  +  +    +   +   + DWV+ RI+ +K   ++RG
Sbjct:    5 LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFS--PRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLR---LDDWVLCRIYNKKGATERRG 166          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.400e-25
Identity = 69/183 (37.70%), Postives = 102/183 (55.74%), Query Frame = 1
Query:  115 VNGG--LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRK---KKPKKRGVVSS 642
            ++GG  L+LP G+RF PTDEELV+HYL R+  GLP+   II E+D+++  P  LP      EK+ YFFS    +    N  +   AAGSGYWK  G ++ +   G+ + V I+K L+F  GK     KT W+MH+Y L  +  +          + + DWV+ RI+ +K   +KP    V ++
Sbjct:    1 MSGGQDLQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFS--PRDRKYPNGSRPNRAAGSGYWKATGADKPV---GSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKK----NSLRLDDWVLCRIYNKKGGLEKPPAAAVAAA 174          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24
Identity = 68/186 (36.56%), Postives = 99/186 (53.23%), Query Frame = 1
Query:  127 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSNNLNITKNSHKN 678
            L LP G+RF PTDEEL+V YL RK  G      +I E+D+++  P  LP      EK+ YFFS    +    N  +    AGSGYWK  G ++ I   G +  VGI+K L+F  GK    TKT W+MH+Y L+  +     T+       + DWV+ RI++++   +K+   + NNL  +   + N
Sbjct:   12 LSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFS--PRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRR--VGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTK-------LDDWVLCRIYKKQTSAQKQ---AYNNLMTSGREYSN 183          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24
Identity = 72/201 (35.82%), Postives = 105/201 (52.24%), Query Frame = 1
Query:  127 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKR----GVV-----SSNNLNITKNSHKNQLQVID 696
            L LP G+RF PTDEEL+V YL RK  G      +I E+D+++  P  LP      EK+ YFFS    +    N  +    AGSGYWK  G ++ I   G  Q VGI+K L+F  GK    TKT W+MH+Y L+  +     T+       + DWV+ RI++++   +K+    G+      S+N  + T +S  +   V+D
Sbjct:   12 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFS--PRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTK-------LDDWVLCRIYKKQSSAQKQVYDNGIANAREFSNNGTSSTTSSSSHFEDVLD 201          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24
Identity = 68/194 (35.05%), Postives = 104/194 (53.61%), Query Frame = 1
Query:  127 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVV------SSNNLNITKNSHKNQL 684
            L LP G+RF PTDEEL+V YL RKV G      +I ++D+++  P  LP      EK+ YFFS    +    N  +    AGSGYWK  G ++ I A G +  VGI+K L+F  GK    TKT W+MH+Y L+  + +   ++       + DWV+ RI+++    +++ V         ++ N + +S  +QL
Sbjct:   12 LSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFS--PRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRR--VGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSK-------LDDWVLCRIYKKTSGSQRQAVTPVQACREEHSTNGSSSSSSSQL 194          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1
Query:  127 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK 624
            L LP G+RF PTDEELV  YL R+    P+   +I E+D+++ +P  LP      EK+ YFFS+   +    N  +   AAG+GYWK  G ++ I   G  + +GI+K L+F  GK     KT W+MH+Y L  +  + +  +     + + DWV+ RI+ +K   +K
Sbjct:   48 LNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSH--RDRKYPNGSRPNRAAGTGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKK--NNLRLDDWVLCRIYNKKGTMEK 208          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22
Identity = 61/160 (38.12%), Postives = 87/160 (54.37%), Query Frame = 1
Query:  133 LPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK--EKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQR 606
            LP G+RF PTDEEL+ HYL RKV      +  I E+D+ +  P  LPG  K  EK+ YFFS    +       +   A  +GYWK  GK+R+I +S T  +VG++KTL+F +G+     K+ WVMH+Y L         +          +WV+ R+FQ+
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFS--LRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL-----EGKFSYHFISRSSKDEWVISRVFQK 169          
The following BLAST results are available for this feature:
BLAST of CX295628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NAC71_ORYSJ4.432e-2639.29NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC68_ORYSJ9.874e-2636.22NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC18_ARATH1.290e-2532.00NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC2_ARATH4.900e-2538.82NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC48_ORYSJ6.400e-2537.70NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC55_ARATH2.432e-2436.56NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC19_ARATH2.432e-2435.82NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC72_ARATH3.176e-2435.05NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NA102_ARATH7.823e-2336.31NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC98_ARATH1.743e-2238.13Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC05074C01SK DroRLeaf1 Citrus clementina cDNA clone C05074C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295628 ID=CX295628; Name=CX295628; organism=Citrus clementina; type=EST; length=727bp
GATTCGGCCGAGGGGATTGTTACATTTTCTTTGCTTTGATTTGGTCCATC
ATCAGTTCAGTTTGAGAGAGGGATTTATACATATATAAATATGGAGAAAC
AAAACAACTTCGTTGTGAATGGTGGGTTAAAGCTGCCTATTGGGTATAGG
TTTCGCCCCACAGATGAAGAGCTTGTGGTTCATTACTTGAAGCGTAAGGT
GTTTGGCTTGCCATTGCCTGCTTCCATTATTCCTGAGCTTGATGTGTTTC
AGTCTCATCCTCTGGGTTTGCCAGGTGATATGAAGGAGAAGAAGAGGTAT
TTTTTTAGCAATATTAGAAATGAGAGTGCGATTGCTAATGACGGCAAATG
CAAAATAGCTGCTGGTTCTGGTTACTGGAAACCTGTTGGCAAAAATAGGC
AAATTTTGGCTTCTGGGACTAAGCAAGTAGTTGGAATAAGAAAGACTCTG
ATTTTCTGCGAAGGCAAGCGCGGCCATGAGACCAAAACTCAATGGGTGAT
GCATCAATATCACCTTGTGGCCATTGCAACAAATACCAACTTAACCCAGC
CGGTATTTAAGATGGTGATCATAGGAGATTGGGTTGTGTATCGCATATTT
CAAAGGAAGAAAAAACCTAAAAAGCGTGGAGTTGTTTCTTCTAATAATCT
CAATATCACTAAGAACAGCCACAAAAATCAGCTGCAGGTTATTGATTTTA
GTGTTATTGAAGCTGATCAGACTGATT
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