CX295658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295658 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23 Identity = 51/75 (68.00%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 25 AEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRID 249 AE IPVL+E+IRTGSPRNRENAAA+LW +C G+ E+L +ARE+ A+ ALKEL+E+GTDRAKRKA S+LEL+Q+ + Sbjct: 550 AESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLELIQQTE 624
BLAST of CX295658 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 25 AEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRI 246 ++ +P L+E IRTGSPRNRENAAAVL +C+GD + L A++L L +L+ +GTDR KRKA +LE + R+ Sbjct: 557 SDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRL 630
BLAST of CX295658 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 25 AEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIAR--ELDAEEALKELSESGTDRAKRKAGSILELLQR 243 AEP+PVL+E+I +G+PRNRENAAAV+ +C+G+ + +AR E L+EL+ +GTDR KRKA +LE + R Sbjct: 572 AEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
BLAST of CX295658 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 25 AEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIAR--ELDAEEALKELSESGTDRAKRKAGSILELLQR 243 AEP+PVL+E+I +G+PRNRENAAAV+ +C+G+ + +AR E L+EL+ +GTDR KRKA +LE + R Sbjct: 572 AEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
BLAST of CX295658 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 25 AEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRIDMAVNS 264 A IP L++ ++ PRNRENAAA+L +C D E+L L A L ELS GT+RAKRKA S+LELL++ + S Sbjct: 548 ANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSSRKLGS 627
BLAST of CX295658 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11 Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 25 AEPIPVLMEVIRTGSPRNRENAAAVLWAICTGDAEQLKIARELDAEEALKELSESGTDRAKRKAGSILELLQRID 249 A+ +PVL++ IR+GSPRN+EN+AAVL +C+ + + L A++L + L E++E+GTDR KRKA +L R + Sbjct: 562 ADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFN 636 The following BLAST results are available for this feature:
BLAST of CX295658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295658 ID=CX295658; Name=CX295658; organism=Citrus clementina; type=EST; length=742bpback to top |