CX295820

Overview
NameCX295820
Unique NameCX295820
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length615
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12052 contig Ccv1_Contig12052:202..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 62/169 (36.69%), Postives = 89/169 (52.66%), Query Frame = 1
Query:  121 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTL 615
            +++VCV  ASG   S LV RLL  GYTV A + +    + ++  L     E  L +++AD  D  S   A++GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTL
Sbjct:    5 SESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTL 169          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 62/169 (36.69%), Postives = 89/169 (52.66%), Query Frame = 1
Query:  121 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTL 615
            +++VCV  ASG   S LV RLL  GYTV A + +    + ++  L     E  L +++AD  D  S   A++GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTL
Sbjct:    5 SESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTL 169          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15
Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  127 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNL--CKKFKLW-HGLSKTL 615
            TVCV  A+G   S LV RLL RGY VHA + + G L+ ++  L     +  LK+++AD     S   A++GC G+F+   P    S   E      T+    +++ +C +  TV K+VFTSS   V    +      H +DE +WSD++    KK   W + +SKTL
Sbjct:    8 TVCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV----NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTL 170          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 59/168 (35.12%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  124 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVN--LCKKFKLW-HGLSKTL 615
            +TVCV  ASG   S LV RLL RGY V A + + G L+ ++  L   N +  L +++AD  +  S  +A+ GC G+F+   P    S   E      T+     +++AC +  TV + VFTSS   V    H+ N     +DE +WSD+   + KK   W + +SKTL
Sbjct:    6 ETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKNV----YDENDWSDLEFIMSKKMTGWMYFVSKTL 169          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  121 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTL 615
            ++TVCV  ASG   S LV RLL R  TV A + +   ++ ++  L     E  L +++AD  D  S   A+KGC+G+F+   P    S   E   +   +E M    ++++CA   TV ++VFTSS   V    H+       +DE  WSD+  C  KK   W + +SKTL
Sbjct:    5 SETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGML--GIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ----LPVYDESCWSDMEFCRAKKMTAWMYFVSKTL 169          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 54/169 (31.95%), Postives = 89/169 (52.66%), Query Frame = 1
Query:  127 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPP---SDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTL 615
            TV V  ASG   S LV +LL  GYTV A + +   +   +  +      ++L +++AD  +  S  +A++GC+G+F+   P    S     + +   VE M   +++ AC +  TV ++VFTSS    V    R  P    +DE +W+DV+ C++ K+  W + +SKTL
Sbjct:   12 TVLVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVGKTKPLMDLPGATERLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMI--SIMRACKEAGTVRRIVFTSS-AGTVNLEERQRPV---YDEESWTDVDFCRRVKMTGWMYFVSKTL 174          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 1
Query:  127 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNL--CKKFKLW-HGLSKTL 615
            TVCV  A+G   S LV RLL RGY V A + N G ++ ++  L     E  L +++AD     S   A++GC G+F+   P    S   E      T+    +++ +CA+  TV K+V+TSS   V    +        +DE +WSD++    KK   W + +SKTL
Sbjct:    8 TVCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV----NVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTL 170          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  130 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL 591
            V V  ASG   S LV +LL  GYTV A + +   ++  +  L     +++L +++AD  +  S   A+ GC+G+F+   P    S     + +   VE M   +++ AC +  TV ++VFTSS  +V   N  + P    +D+ NWSD++ C++ K+
Sbjct:    8 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGML--SIMRACKEAGTVKRIVFTSSAGSV---NIEERPRP-AYDQDNWSDIDYCRRVKM 158          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 1
Query:  118 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAH-NVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNL--CKKFKLW 594
            A  TVCV  A+G   S LV RLL RGY VHA + +    + ++  L     +  L +++AD     S   A++GC G+F+   P    S   E      T+    +++E+CA+ NTV ++VFTSS   +     +       +D+ +WSD++    KK   W
Sbjct:   14 AVPTVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEQQ----KLFYDQTSWSDLDFIYAKKMTGW 171          
BLAST of CX295820 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 1
Query:  121 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLC---KKFKLWHGLSKTL 615
            +K  CV+  +G+ AS L++ LL  GY V+  + +    + I   L    E   LK+F+AD  D  S  ++  GC  +F+   P    S+    D +   ++ +   NVL++C ++ +V +V++TSS  AV  +N   + T    +E NW+DV      K F   + +SK L
Sbjct:   10 SKKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKI-AHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVI--NVLKSCLKSKSVKRVIYTSSAAAVSINNL--SGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVL 175          
The following BLAST results are available for this feature:
BLAST of CX295820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DFRA_PYRCO3.046e-1636.69Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MALDO3.046e-1636.69Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_GERHY1.975e-1534.73Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
DFRA_ARATH4.399e-1535.12Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_VITVI1.084e-1334.50Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_MAIZE4.117e-1331.95Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_CALCH4.117e-1333.53Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_HORVU7.023e-1331.21Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_PETHY5.945e-1231.48Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
BAN_ARATH1.730e-1129.82Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05076C03SK DroRLeaf1 Citrus clementina cDNA clone C05076C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295820 ID=CX295820; Name=CX295820; organism=Citrus clementina; type=EST; length=615bp
CTTGAATTAATTGGAAATTACTTAAATCTCCCTCTCCTCCCAAAAATGGC
GCCACCAGCATCATCCGGTATTGAAGAAGAAATTGCAGTTGATCGAGACG
GTTATGATTCTTCAAACGCAACAAAGACAGTATGCGTAATGGACGCCTCT
GGCCACTTTGCCTCCGCCCTCGTCCGCCGTCTCTTGCTTAGAGGCTACAC
CGTCCACGCTGCCCTCCACAACCACGGAAAATTGCAGTGTATCGAAGGAG
AGTTAATTAATTACAACGAGGAGAAGAAATTGAAAGTTTTCCAGGCAGAC
CCCTTTGATTACCACAGCCTCGTGAATGCTTTAAAGGGTTGCTCCGGTCT
GTTCTACTCCTTTGAGCCTCCCTCCGACCACTCCACCTACGATGAATTGA
CGGCGGAAGTAGAGACAATGGCAGCTCACAACGTGCTGGAAGCGTGCGCA
CAGACAAATACAGTTGACAAAGTCGTCTTCACGTCTTCTCTAACCGCCGT
CGTCTGGAGTAACCACCGCGACAATCCGACGTCGCACGACTTCGATGAGC
GAAATTGGAGTGACGTCAATTTGTGCAAGAAATTCAAGCTATGGCATGGT
TTGTCAAAGACGCTG
back to top