CX295850

Overview
NameCX295850
Unique NameCX295850
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 8.929e-103
Identity = 180/206 (87.38%), Postives = 191/206 (92.72%), Query Frame = 3
Query:   66 IISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            IIS D+I   KVP YY++VS G R+VS+RAQVTTEAPAKVEK SKK +EGVIVNKF+PK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIGVIADGVD NGKPHKLRLYS ASSALGDFGDSKTVSLCVKRLVYTN+ GE VKGVCSNFLCDLKPGAEVKITGPVGKEMLMP+DPNATVIMLATGTGIAPFR FLW
Sbjct:   25 IISTDKINFNKVPLYYRNVSGGSRLVSIRAQVTTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIADGVDANGKPHKLRLYSTASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLW 230          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.129e-97
Identity = 166/212 (78.30%), Postives = 190/212 (89.62%), Query Frame = 3
Query:   66 IISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTE------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            +ISPD+I+ KKVP YY++VS  G++  +RAQ+ ++      APAKVEK SKKMEEG+ VNKFKPKTPY+GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI DG DKNGKPHKLRLYSIASSALGDFGD+K+VSLCVKRL+YTN+ GE +KGVCSNFLCDLKPGAEVK+TGPVGKEMLMP+DPNAT+IML TGTGIAPFR FLW
Sbjct:   26 VISPDKISYKKVPLYYRNVSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLW 237          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 3.286e-97
Identity = 167/206 (81.07%), Postives = 187/206 (90.78%), Query Frame = 3
Query:   66 IISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            I++P+R+  KKV     +VS  GRV ++RAQVTTEAPAKV K SKK +E ++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIG++ DG+DKNGKPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GE+VKGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DPNATVIML TGTGIAPFR FLW
Sbjct:   25 IVAPERLVFKKVSL--NNVSISGRVGTIRAQVTTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLW 228          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 4.017e-95
Identity = 165/208 (79.33%), Postives = 187/208 (89.90%), Query Frame = 3
Query:   66 IISPDRITLKKVPFYYKDVSTGGRVVSVRAQVT-TEAP-AKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            +I+ ++I   KVP YY++VS GG+V ++RA  +  EAP AKVEK SKKMEEGVIVNK+KPK PY GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI +G+DKNGKPHKLRLYSIAS  LGDFGDSKTVSLCVKRL+YTN+NGEIVKGVCSNFLCDLKPG+EV +TGPVGKEMLMP+DPNAT+IMLATGTGIAPFR FLW
Sbjct:   26 VITHEKINFNKVPLYYRNVSVGGKVGTIRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPEGIDKNGKPHKLRLYSIASRPLGDFGDSKTVSLCVKRLIYTNDNGEIVKGVCSNFLCDLKPGSEVVLTGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLW 233          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 8.949e-95
Identity = 165/209 (78.95%), Postives = 186/209 (89.00%), Query Frame = 3
Query:   66 IISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPA---KVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            I++P+R+  KKV      VS  GRV ++RAQ+TTEA A   KV K SKK +EG++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVF+TEGEVPY+EGQSIG++ DG+DKNGKPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GE+VKGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DPNATVIML TGTGIAPFR FLW
Sbjct:   25 IVAPERLVFKKVSL--NSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFTTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLW 231          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 8.376e-93
Identity = 166/209 (79.43%), Postives = 181/209 (86.60%), Query Frame = 3
Query:   69 ISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEA----PAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            +SP RI LKK    Y+      RVVSV+AQVTT+     P KV KESKK EEG++VNKFKPK PY GRCLLNTKITGDDAPGETWH+VF+TEGEVPY+EGQSIGVI +G+DKNGKPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GEIVKGVCSNFLCDLKPG E KITGPVGKEMLMP+DPNAT+IML TGTGIAPFR FLW
Sbjct:   26 VSPQRIFLKKSTVCYR------RVVSVKAQVTTDTTEAPPVKVVKESKKQEEGIVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHIVFTTEGEVPYREGQSIGVIPEGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDGGEIVKGVCSNFLCDLKPGDEAKITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLW 228          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 2.979e-90
Identity = 162/212 (76.42%), Postives = 185/212 (87.26%), Query Frame = 3
Query:   69 ISPDRITLKKVPFYYK--DVSTGGRVVSVRAQVTTEA----PAK-VEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            I+P+RI   K  FYYK  +V TG RV S++AQ+TTE     PAK VEK SKK EEGVIVN+++PK PY G+CLLNTKIT DDAPGETWHMVFS +GE+PY+EGQS+GVIADG+DKNGKPHK+RLYSIASSALGD G+S+TVSLCVKRLVYTN+ GE VKGVCSNFLCDL PG++VK+TGPVGKEMLMP+DPNATVIMLATGTGIAPFR FLW
Sbjct:   26 IAPERIRFTKGAFYYKSNNVVTGKRVFSIKAQITTETDTPTPAKKVEKVSKKNEEGVIVNRYRPKEPYTGKCLLNTKITADDAPGETWHMVFSHQGEIPYREGQSVGVIADGIDKNGKPHKVRLYSIASSALGDLGNSETVSLCVKRLVYTNDQGETVKGVCSNFLCDLAPGSDVKLTGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLW 237          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.384e-87
Identity = 155/190 (81.58%), Postives = 171/190 (90.00%), Query Frame = 3
Query:  135 RVVSVRAQVTTE-------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            R + +RAQV+T        APAK EK SKK +EGV+ NK++PK PY+G+CLLNTKIT DDAPGETWHMVFSTEGE+PY+EGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN+ GEIVKGVCSNFLCDLKPG++VKITGPVGKEMLMP+DPNA +IMLATGTGIAPFR FLW
Sbjct:   41 RGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDPNANIIMLATGTGIAPFRSFLW 230          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_CYAPA (Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.442e-60
Identity = 113/184 (61.41%), Postives = 138/184 (75.00%), Query Frame = 3
Query:  135 RVVSVRAQVTTEAPAKVEKES--KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFL 680
            + VS +   T E    +  ++   K +  + +N F+P  PYIG+C+ N +I G+ APGET H++F+ EG+VPY EGQSIG+I  G DK+GKPHKLRLYSIAS+  GDFGD KTVSL VKRL YT+ NG +VKGVCSN+LCDLKPG EV ITGPVG  MLMP D +AT+IMLATGTGIAPFR FL
Sbjct:   47 QAVSAKPATTFEVDTTIRAQAVDAKKKGDIPLNLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVPYLEGQSIGIIPPGTDKDGKPHKLRLYSIASTRHGDFGDDKTVSLSVKRLEYTDANGNLVKGVCSNYLCDLKPGDEVMITGPVGTTMLMPEDQSATIIMLATGTGIAPFRSFL 230          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_SYNY3 (Ferredoxin--NADP reductase OS=Synechocystis sp. (strain PCC 6803) GN=petH PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.767e-50
Identity = 100/187 (53.48%), Postives = 129/187 (68.98%), Query Frame = 3
Query:  126 TGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            +G   V+  A  + +      KE K   + + VN ++PKTPYIG+ L N  +  + A G   H+ F  + G++ Y EGQSIG+I  G D  GKPHKLRLYSIAS+  GDFGD KTVSLCV++L Y NE GE V+GVCS +LC++K G ++ ITGPVGKEML+P D +A ++MLATGTGIAPFR FLW
Sbjct:   97 SGSEAVANPAPESNKTMTTTPKEKKA--DDIPVNIYRPKTPYIGKVLENYPLVREGAIGTVQHLTFDLSAGDLRYLEGQSIGIIPPGEDDKGKPHKLRLYSIASTRHGDFGDDKTVSLCVRQLEYQNEAGETVQGVCSTYLCNIKEGDDIAITGPVGKEMLLPPDEDANIVMLATGTGIAPFRAFLW 281          
The following BLAST results are available for this feature:
BLAST of CX295850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FENR1_TOBAC8.929e-10387.38Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
FENR_SPIOL1.129e-9778.30Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR1_PEA3.286e-9781.07Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_MESCR4.017e-9579.33Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FENR_VICFA8.949e-9578.95Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FNRL1_ARATH8.376e-9379.43Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FNRL2_ARATH2.979e-9076.42Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR1_ORYSJ1.384e-8781.58Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_CYAPA1.442e-6061.41Ferredoxin--NADP reductase, cyanelle OS=Cyanophora... [more]
FENR_SYNY31.767e-5053.48Ferredoxin--NADP reductase OS=Synechocystis sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC05076E09SK DroRLeaf1 Citrus clementina cDNA clone C05076E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295850 ID=CX295850; Name=CX295850; organism=Citrus clementina; type=EST; length=684bp
ATGCAGTGAGTGCTGCATCTTCTCTTCCGACTTCCAAGTCCACTTCGCTT
CCAACCAGAACCTCTATCATCTCTCCTGACAGAATCACCTTAAAAAAGGT
TCCATTTTACTACAAAGATGTTTCAACTGGAGGGAGAGTGGTTTCTGTCA
GAGCTCAGGTTACCACTGAGGCTCCTGCTAAGGTCGAGAAAGAGTCCAAG
AAAATGGAGGAAGGTGTTATTGTTAACAAGTTCAAACCTAAGACACCTTA
CATTGGCAGATGCCTTTTAAACACTAAGATCACTGGTGATGATGCTCCTG
GAGAGACCTGGCACATGGTCTTCAGCACTGAAGGAGAGGTTCCCTACAAA
GAAGGGCAATCAATTGGGGTGATTGCAGATGGTGTTGACAAGAATGGGAA
GCCTCACAAACTGAGATTATACTCCATTGCTAGCAGTGCCCTTGGTGACT
TTGGAGACTCCAAAACTGTTTCTTTATGTGTGAAAAGGCTTGTGTACACC
AACGAAAATGGAGAAATTGTTAAGGGAGTCTGCTCAAATTTCTTGTGTGA
CTTGAAGCCTGGGGCTGAAGTGAAAATTACAGGACCTGTTGGGAAAGAAA
TGCTCATGCCAAGGGATCCCAATGCTACAGTCATCATGCTTGCGACTGGA
ACTGGAATCGCTCCATTCCGTGGATTTTTGTGGA
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