CX296512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 4.322e-53 Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMD-GSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 391 TGAAGDLQQITGLAKQMV TFGMS+IGPWSLMD G+QSGDVIMRMMARNSMSEKLAEDID AVKRLSD AYEIALSQIR+NREA+DKIVEVLLEKET+SGDEFRAILSEF EIP ENRV Sbjct: 548 TGAAGDLQQITGLAKQMVVTFGMSDIGPWSLMDSGAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRV 666
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 4.779e-52 Identity = 104/118 (88.14%), Postives = 108/118 (91.53%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 391 TGA DLQQITGLAKQMVTTFGMSEIGPWSLMD S+ DVIMRMMARNSMSEKLA DID AVK LSD+AYEIALSQIRNNREA+DKIVE+LLEKETMSGDEFRAILSEF EIP ENRV Sbjct: 554 TGAVSDLQQITGLAKQMVTTFGMSEIGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPENRV 671
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.008e-50 Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 391 TGA GDLQQITGLA+QMVTTFGMS+IGPWSLMD S DVIMRMMARNSMSEKLAEDID+AVK+LSD AYEIALS I+NNREA+DK+VEVLLEKET+ GDEFRAILSEF EIP ENRV Sbjct: 561 TGAVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPENRV 678
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 7.914e-39 Identity = 78/114 (68.42%), Postives = 98/114 (85.96%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGS-QSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIP 376 TGAAGDLQQ+T +A+QMVT FGMSEIGPW+L D + + DV++RM+ARNSMSEKLAEDID+ VK++ AYE+A +RNNREAIDK+V+VLLEKET++GDEFRAILSE+ + P Sbjct: 558 TGAAGDLQQVTEIARQMVTMFGMSEIGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDEFRAILSEYTDQP 671
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.492e-37 Identity = 76/118 (64.41%), Postives = 99/118 (83.90%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMD-GSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENR 388 TGAAGDLQQ+T +A++MVT FGMSEIGPW+L + +Q GDV++RM+AR+SMSE+LA DIDAAV+ + D AYE+A + +R NR AID++V+VL+EKET+ GDEFRAILSE V+I E R Sbjct: 557 TGAAGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSEHVDIGKERR 674
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.227e-23 Identity = 53/120 (44.17%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMR--MMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 391 TGA GDLQQ+T +A+QMVT FGMS +GP SL S G+V + +M R+ SE++A IDA V++L+++ +++A ++ RE +D++V++L+EKET+ G+EFR I++E+ E+P + ++ Sbjct: 506 TGAGGDLQQVTEMARQMVTRFGMSNLGPISLE--SSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEVPVKEQL 623
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.790e-22 Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIM--RMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 385 TGA+ DLQQ+T LA+QMVT FGMS IGP +L D S +G V + M + + +E +A+ ID V+++ YE A+ + +NR ID IVE LL+KETM GDEFR +LS + +P +N Sbjct: 520 TGASSDLQQVTNLARQMVTRFGMSNIGPLALEDES-TGQVFLGGNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELLSTYTILPNKN 636
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.693e-20 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMR--MMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 385 TGA+ DLQQ+T +A+QMVT FGMS+IGP SL SQ GD + M + S+++A +ID V+ + Y A I +NR ID++V++L+EKET+ G+EFR I+ E+ IP +N Sbjct: 507 TGASNDLQQVTSMARQMVTRFGMSKIGPLSLE--SQGGDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDIVKEYTAIPEKN 622
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.823e-20 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSM-SEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIP 376 TGA DLQQ+T +A+QMVT FGMS IGP SL + S + R M +S SE +A ID V+ + + + I++NR IDK+V++L+EKET+ GDEFR I+ +F +P Sbjct: 507 TGAGNDLQQVTSMARQMVTRFGMSNIGPLSL-ESQNSDPFLGRTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGDFTSLP 619
BLAST of CX296512 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20 Identity = 48/116 (41.38%), Postives = 76/116 (65.52%), Query Frame = 2 Query: 38 TGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 385 TGA+ DLQQ+T +A+QMVT FGMS+IGP SL + M + S+++A +ID V+ + Y+ A +++NR +D++V++L+EKET+ G+EFR I+ E+ IP +N Sbjct: 507 TGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGSDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKEYTAIPEKN 622 The following BLAST results are available for this feature:
BLAST of CX296512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296512 ID=CX296512; Name=CX296512; organism=Citrus clementina; type=EST; length=557bpback to top |