CX296561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_XENLA (Methylthioribose-1-phosphate isomerase OS=Xenopus laevis GN=mri1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.818e-31 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 +C+ETRP+NQGSRLTA+ELV+++IP M++ +V+AV+VGADRV ANGDT NKIGTY LA+ AK+H I FYVAAP TS DL+L +G IVIEER + EL Sbjct: 196 FCTETRPYNQGSRLTAYELVYEKIPATLITDSMASVTMRERKVTAVVVGADRVVANGDTANKIGTYQLAIIAKYHGIPFYVAAPSTSCDLSLPTGGSIVIEERPSHEL 303
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_XENTR (Methylthioribose-1-phosphate isomerase OS=Xenopus tropicalis GN=mri1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.506e-31 Identity = 64/108 (59.26%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 +C+ETRP+NQGSRLTA+ELV+++IP ++D +V+AV+VGADRV ANGDT NKIGTY LA+ A++H I FYVAAP TS DL+L +G IVIEER + EL Sbjct: 196 FCTETRPYNQGSRLTAYELVYEKIPATLITDSMASAAIRDRKVTAVVVGADRVVANGDTANKIGTYQLAITARYHGIPFYVAAPSTSCDLSLPTGGSIVIEERPSHEL 303
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_HUMAN (Methylthioribose-1-phosphate isomerase OS=Homo sapiens GN=MRI1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.895e-30 Identity = 65/109 (59.63%), Postives = 80/109 (73.39%), Query Frame = 3 Query: 3 AYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 A+C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NK+GTY LA+ AK H I FYVAAP +S DL L +G+EI+IEER +EL Sbjct: 197 AFCTETRPYNQGARLTAFELVYEQIPATLITDSMVAAAMAHRGVSAVVVGADRVVANGDTANKVGTYQLAIVAKHHGIPFYVAAPSSSCDLRLETGKEIIIEERPGQEL 305
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_BOVIN (Methylthioribose-1-phosphate isomerase OS=Bos taurus GN=MRI1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.895e-30 Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 3 Query: 3 AYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 A+C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NK+GTY LA+ AK H I FYVAAP +S DL L +G+EIVIEER +EL Sbjct: 197 AFCTETRPYNQGARLTAFELVYEQIPATLIADSMAAAAMAHQGVSAVVVGADRVVANGDTANKVGTYQLAIAAKHHGIPFYVAAPSSSCDLRLETGREIVIEERPDQEL 305
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_RAT (Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus GN=Mri1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.475e-30 Identity = 66/108 (61.11%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 +C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NKIGTY LA+ AK H I FYVAAP +S DL L +G+EIVIEER ++EL Sbjct: 198 FCTETRPYNQGARLTAFELVYEKIPATLITDSMAAAAMVHQGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGIPFYVAAPSSSCDLRLETGKEIVIEERPSQEL 305
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.221e-30 Identity = 65/108 (60.19%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 +C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NKIGTY LA+ AK H + FYVAAP +S DL L +G+EIVIEER ++EL Sbjct: 198 FCTETRPYNQGARLTAFELVYEQIPATLITDSMAAAAMAHRGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGVPFYVAAPSSSCDLHLETGKEIVIEERPSQEL 305
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_DESHY (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain Y51) GN=mtnA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.574e-29 Identity = 65/108 (60.19%), Postives = 77/108 (71.30%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRPF QG+RLTA EL++D IP LM+ G + VIVGADR+AANGDT NKIGTYSLA+ A H I FYVAAP ++IDL + SGQ+I IEER+ KEL Sbjct: 185 YAGETRPFLQGARLTALELMNDHIPVTLIADNMAGFLMQQGNIDLVIVGADRIAANGDTANKIGTYSLAVLAHAHGIPFYVAAPTSTIDLKVPSGQDIPIEERNPKEL 292
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_DESHD (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=mtnA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.574e-29 Identity = 65/108 (60.19%), Postives = 77/108 (71.30%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRPF QG+RLTA EL++D IP LM+ G + VIVGADR+AANGDT NKIGTYSLA+ A H I FYVAAP ++IDL + SGQ+I IEER+ KEL Sbjct: 185 YAGETRPFLQGARLTALELMNDHIPVTLIADNMAGFLMQQGNIDLVIVGADRIAANGDTANKIGTYSLAVLAHAHGIPFYVAAPTSTIDLKVPSGQDIPIEERNPKEL 292
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_SOLUE (Methylthioribose-1-phosphate isomerase OS=Solibacter usitatus (strain Ellin6076) GN=mtnA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.160e-28 Identity = 60/108 (55.56%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRPF QG+RLT +EL D IP MK GR+ V+VGADR+AANGD NK+GTYS+A+ AK + + FYVAAP++++DLTLSSG++I IEERSA E+ Sbjct: 183 FADETRPFLQGARLTVWELQQDSIPTTLITDNMAGHFMKAGRIGCVVVGADRIAANGDVANKVGTYSVAVLAKENGVPFYVAAPISTLDLTLSSGEQIPIEERSAAEV 290
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_CALS8 (Methylthioribose-1-phosphate isomerase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=mtnA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.739e-28 Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRP+ QG+RLTAFEL D IP LMK G++ VIVGADR+A NGDT NKIGTYSL++ AK H I FY++AP+++ID + SG EI IEERS E+ Sbjct: 183 YVDETRPYLQGARLTAFELSEDGIPNTVICDNMAGYLMKLGKIDCVIVGADRIALNGDTANKIGTYSLSVLAKHHGIPFYISAPISTIDFNIKSGSEIPIEERSEDEI 290 The following BLAST results are available for this feature:
BLAST of CX296561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296561 ID=CX296561; Name=CX296561; organism=Citrus clementina; type=EST; length=335bpback to top |