CX296639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.999e-32 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VFLP VK+LLR+DFHVAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRALLNESN+FVGDK AYAL Sbjct: 47 VFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYAL 118
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.452e-32 Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VFLPLVK+ LR DFHVAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERRALL ESN+FVGDKVAYAL Sbjct: 47 VFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYAL 118
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 1.295e-31 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VFLPLVKS LRSDF VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRA+LNES++FVGDKVAYAL Sbjct: 47 VFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYAL 118
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 2.886e-31 Identity = 63/72 (87.50%), Postives = 68/72 (94.44%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VFLP+VKS LR +FHVAAQNCWV+KGGAFTGEVSAEMLVNL +PWVILGHSERRALL ESN+FVGDKVAYAL Sbjct: 47 VFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYAL 118
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 9.284e-30 Identity = 62/72 (86.11%), Postives = 67/72 (93.06%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VFLP+VKS LR + VAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERR+LL ESN+FVGDKVAYAL Sbjct: 47 VFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYAL 118
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 1.936e-27 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VFLP+VK+ LR + VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERR+LL ES++FVG+KVAYAL Sbjct: 47 VFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYAL 118
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 2.528e-27 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VFLP VK LR + VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERR+LL ES++FVG+KVAYAL Sbjct: 47 VFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYAL 118
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.003e-24 Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 48 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERRALLNE+N+FVGDKVAYAL Sbjct: 3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYAL 59
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.934e-23 Identity = 51/71 (71.83%), Postives = 57/71 (80.28%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYA 215 VFLP + L+ + VAAQNCWV+KGGAFTGEVSA+ML NL I WVILGHSERR LL ESN+FVG K AYA Sbjct: 47 VFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYA 117
BLAST of CX296639 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.643e-18 Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 3 VFLPLVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 218 V++ VKS L ++AQNCW+ KGGAFTGE+S E L +L WVILGHSERR ++ E N+F+G K AYAL Sbjct: 113 VYIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYAL 184 The following BLAST results are available for this feature:
BLAST of CX296639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296639 ID=CX296639; Name=CX296639; organism=Citrus clementina; type=EST; length=218bpback to top |