CX296650

Overview
NameCX296650
Unique NameCX296650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length251
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX296650 vs. ExPASy Swiss-Prot
Match: TMP14_ARATH (Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.240e-26
Identity = 60/89 (67.42%), Postives = 67/89 (75.28%), Query Frame = 1 
Query:    1 TRRRKATTYCRKMARNVIAMAT---GEAPA---EVAATELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMISAIDRLPLVPG 249
            TR  KAT YCRK+ RNV+  AT   GEAPA   E   TELPEIVKT QEAW+KV+DKYA+ SLA    +A+WGS GMISAIDRLPLVPG
Sbjct:   44 TRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPG 132
The following BLAST results are available for this feature:
BLAST of CX296650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TMP14_ARATH6.240e-2667.42Thylakoid membrane phosphoprotein 14 kDa, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionC05801C05SK FerrChloL1 Citrus clementina cDNA clone C05801C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296650 ID=CX296650; Name=CX296650; organism=Citrus clementina; type=EST; length=251bp
ACCCGCCGAAGGAAGGCAACTACATATTGTCGAAAGATGGCCCGCAATGT
CATTGCCATGGCAACAGGGGAGGCTCCAGCTGAAGTTGCTGCAACTGAGC
TTCCAGAGATTGTCAAGACCGTGCAAGAAGCTTGGGACAAAGTTGAAGAT
AAGTATGCAGTGACTTCACTTGCTGTAACTGTTGCTATTGCCGTATGGGG
CTCTACGGGAATGATTTCGGCAATTGATAGGCTTCCTTTAGTTCCTGGAG
T
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