CX296656

Overview
NameCX296656
Unique NameCX296656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 5.421e-70
Identity = 127/176 (72.16%), Postives = 149/176 (84.66%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE------TFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEELI 511
            EPKISDFGLARLMNPIDTHLSTFVNGEFGD GYVAPEY+RT+VATPKGDVYSFG VLLELVTG++ T+V K  E       FKGNLVEWI +LSS  +LQ+AID+ L+  GVD+E+F+ LKVACNCVLP I K+RPTMFEVYQ LRAIGE Y+FT +D+I++PS+SG+ D +EELI
Sbjct:  442 EPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLLGNGVDDEIFKVLKVACNCVLPEIAKQRPTMFEVYQLLRAIGESYNFTADDDILIPSESGEGDFIEELI 617          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 5.846e-40
Identity = 76/146 (52.05%), Postives = 113/146 (77.40%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 439
            + +I+D+GLA+L+   D++ S+F NG+ G+LGYVAPEY+ T+VA+ KGDVY FG VLLELVTG++P +V    E FKG+LV+W++Q   TG+ +DAID+ +  KG D E+ QFLK+AC+CV+ + PKERPTM +VY+ L+ + +++
Sbjct:  439 DARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSICDKGHDEEILQFLKIACSCVV-SRPKERPTMIQVYESLKNMADKH 583          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.793e-34
Identity = 69/151 (45.70%), Postives = 109/151 (72.19%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTE 454
            + ++ D+GL +L++  D+  S+F NG+FG   YVAPEY+ T+VA+  GDVY FG VLLE+VTG++P  +    E FK +LVEW+++  S G+ +DAID+ +  KG D+E+ Q L++AC+CV+ + PKERP M +VY+ L+ +G+++ F +E
Sbjct:  429 DARVIDYGLGKLVSSQDSKDSSFSNGKFG---YVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAIDRRIFGKGYDDEIMQVLRIACSCVV-SRPKERPLMIQVYESLKNLGDQHGFFSE 575          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.817e-26
Identity = 64/142 (45.07%), Postives = 90/142 (63.38%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            EPK++DFGLARL++  ++H+ST + G FG   Y+ PEY ++  AT KGDVYSFG +LLELVTG+ PT      E+  GNLV W  Q  + G+  D ID  LV+  + N   + L++A  C+  T P +RP M +V + L+ I
Sbjct: 1056 EPKVADFGLARLISACESHVSTVIAGTFG---YIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG-PDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAET-PAKRPNMLDVLKALKEI 1192          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 112.464 bits (280), Expect = 1.183e-24
Identity = 59/136 (43.38%), Postives = 90/136 (66.18%), Query Frame = 2
Query:   11 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 418
            ++DFGLARLM+P +TH+ST +    G LGY+ PEY +  VAT KGDVYSFG VLLEL+T +RP ++ K P+  + +L+ W+ ++    +  +  D  + +K  D E+F+ L++AC C L   PK+RPT  ++  +L
Sbjct:  876 LADFGLARLMSPYETHVSTDL---VGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCK-PKGCR-DLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLC-LSENPKQRPTTQQLVSWL 1005          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.447e-22
Identity = 64/144 (44.44%), Postives = 92/144 (63.89%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK--GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            E ++SDFG+ARLM+ +DTHLS  V+   G  GYV PEY ++   + KGDVYS+G VLLEL+TG++PT+ A   +    NLV W+ +L + G++ D  D+ L+ +   ++ EL Q LKVAC C L     +RPTM +V    + I
Sbjct: 1027 EARVSDFGMARLMSAMDTHLS--VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGD---NNLVGWV-KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACAC-LDDRHWKRPTMIQVMAMFKEI 1163          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.447e-22
Identity = 64/144 (44.44%), Postives = 92/144 (63.89%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK--GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            E ++SDFG+ARLM+ +DTHLS  V+   G  GYV PEY ++   + KGDVYS+G VLLEL+TG++PT+ A   +    NLV W+ +L + G++ D  D+ L+ +   ++ EL Q LKVAC C L     +RPTM +V    + I
Sbjct: 1027 EARVSDFGMARLMSAMDTHLS--VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGD---NNLVGWV-KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACAC-LDDRHWKRPTMIQVMAMFKEI 1163          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.889e-22
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:   11 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            ++DFGLARL+ P DTH++T +    G LGY+ PEY +  VAT KGDVYSFG VLLEL+TG RP +V K   +   +L+ W+ Q+ +  +  +  D  +  K    E+   L++AC C L   PK RPT  ++  +L  I
Sbjct:  885 LADFGLARLILPYDTHVTTDL---VGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGS--RDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRC-LGENPKTRPTTQQLVSWLENI 1017          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.497e-22
Identity = 57/139 (41.01%), Postives = 85/139 (61.15%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 418
            E  ++DFGLARL+ P DTH++T +    G LGY+ PEY+++L+AT +GDVYSFG VLLELVTG RP  V K       +LV  + Q+ +  +  + ID  +     +  + + L++AC C+    P+ RP + EV  +L
Sbjct:  893 EAHLADFGLARLLRPYDTHVTTDL---VGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSC--RDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCI-DHEPRRRPLIEEVVTWL 1025          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.225e-21
Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEE 505
            E ++SDFG+ARL++ +DTHLS  V+   G  GYV PEY ++   T KGDVYS+G +LLEL++G++P +  +  E    NLV W  QL    +  + +D  LV  K  D ELF +LK+A  C L   P +RPTM    Q +    E    T EDE +      +  ++EE
Sbjct: 1000 EARVSDFGMARLVSALDTHLS--VSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGE--DNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQC-LDDRPFKRPTMI---QLMAMFKEMKADTEEDESLDEFSLKETPLVEE 1160          
The following BLAST results are available for this feature:
BLAST of CX296656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
Y5838_ARATH5.421e-7072.16Probably inactive leucine-rich repeat receptor-lik... [more]
Y1719_ARATH5.846e-4052.05Probable inactive receptor kinase At1g27190 OS=Ara... [more]
Y1699_ARATH4.793e-3445.70Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH2.817e-2645.07Leucine-rich repeat receptor protein kinase EXS OS... [more]
PSKR1_ARATH1.183e-2443.38Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
BRI1_SOLPE1.447e-2244.44Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC1.447e-2244.44Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
PSKR1_DAUCA1.889e-2242.45Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
PSKR2_ARATH5.497e-2241.01Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
BRL1_ARATH1.225e-2140.24Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05801C12SK FerrChloL1 Citrus clementina cDNA clone C05801C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296656 ID=CX296656; Name=CX296656; organism=Citrus clementina; type=EST; length=513bp
TGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAACCCAATTG
ATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTTGGGTTAT
GTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGGGAGATGT
TTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAGAGACCTA
CCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGTTGAATGG
ATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTGATAAATG
CTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTTAAAGTTG
CATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTACCATGTTT
GAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATTTTACCAC
TGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGATATTCTTG
AAGAACTTATTGT
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