CX296715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.427e-42 Identity = 104/163 (63.80%), Postives = 118/163 (72.39%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLAS 697 MERARRLA++A L RLV+++K H S +PSRY+SSLS P+VCS N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPKSIR+DSMK+SKFDEGLTESQMI HMQ LAS Sbjct: 1 MERARRLANKAILGRLVSQTK-----HNPS---ISSPALCSPSRYVSSLS--PYVCSGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFPNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLAS 142
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.887e-40 Identity = 103/163 (63.19%), Postives = 115/163 (70.55%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLAS 697 MERARRLA L RLV+++K H S +PSRY+SSLS P+VCS N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPKSIR+DSMK+SKFDEGLTESQMI HMQ LAS Sbjct: 1 MERARRLA---ILGRLVSQTK-----HNPS---ISSPALCSPSRYVSSLS--PYVCSGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFPNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLAS 139
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.631e-40 Identity = 102/163 (62.58%), Postives = 115/163 (70.55%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLAS 697 MERARRLA L RLV+++K H S +PSRY+SSLS P+VCS N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPK+IR+DSMK+SKFDEGLTESQMI HMQ LAS Sbjct: 1 MERARRLA---MLGRLVSQTK-----HNPS---ISSSALCSPSRYVSSLS--PYVCSGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFSNLDSLIDATVPKAIRLDSMKYSKFDEGLTESQMIAHMQDLAS 139
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.660e-40 Identity = 102/163 (62.58%), Postives = 114/163 (69.94%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLAS 697 MERARRLA L RLV+++K H S +PSRY+SSLS P+VC N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPKSIR+DSMK+SKFDEGLTESQMI HMQ LAS Sbjct: 1 MERARRLA---MLGRLVSQTK-----HNPS---ISSPALCSPSRYVSSLS--PYVCGGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFSNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLAS 139
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39 Identity = 94/162 (58.02%), Postives = 107/162 (66.05%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLAS 697 MERAR+LA+RA LKRLV++SKQ N S Y PSRY+SSLS F NN++S Q Q R ISVEALKPSDTF RRHNSATPE+Q KM+E G +LD+LIDATVP+SIR +SMK KFD GLTESQMIEHMQ LAS Sbjct: 1 MERARKLANRAILKRLVSQSKQSRSNEIPSSSL------YRPSRYVSSLSPYTFQARNNAKSFNTQ----------------QARSISVEALKPSDTFPRRHNSATPEEQTKMAEFCGFQSLDALIDATVPQSIRSESMKLPKFDSGLTESQMIEHMQNLAS 140
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37 Identity = 93/163 (57.06%), Postives = 109/163 (66.87%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSK-FDEGLTESQMIEHMQKLAS 697 MERARRLA R +KRLVNE+K+ HR + T TPSRY+SS+S + S S S H QTR ISV+ALKPSDTF RRHNSATP++QA+M+ G DNL++LID+TVPKSIR+DSMKFS FDEGLTESQMIEHM LAS Sbjct: 1 MERARRLAYRGIVKRLVNETKR----HRNGESSLLPTTTVTPSRYVSSVSSFLHRRRDVSGSAFTTSGRNQH----------QTRSISVDALKPSDTFPRRHNSATPDEQAQMANYCGFDNLNTLIDSTVPKSIRLDSMKFSGIFDEGLTESQMIEHMSDLAS 149
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.806e-37 Identity = 94/169 (55.62%), Postives = 116/169 (68.64%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTP-------SRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLAS 697 MERARRLA+RA LKRL++E+KQ +R+++ T P SRY+SS+S + + S+ D SR + G G SQ+R ISVEALKPSDTF RRHNSATP++Q KM+E VG D LDSL+DATVPKSIR+ MKF+KFD GLTE QMIEHM+ LAS Sbjct: 1 MERARRLANRATLKRLLSEAKQ----NRKTESTSTTTTTPLPFSLSGSSSRYVSSVSNS-ILRGRGSKPDNNVSRRVG--GFLGVGYPSQSRSISVEALKPSDTFPRRHNSATPDEQTKMAESVGFDTLDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKDLAS 162
BLAST of CX296715 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.358e-37 Identity = 89/162 (54.94%), Postives = 114/162 (70.37%), Query Frame = 2 Query: 212 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLAS 697 MERARRLA R +KRLVN++K+ HR ++ + P+RY+SSLS PF+ + R+++H +G QTR ISV+A+KPSDTF RRHNSATP++Q M++ G D++DSLIDATVPKSIR+DSMKFSKFD GLTESQMI+HM LAS Sbjct: 1 MERARRLAYRGIVKRLVNDTKR----HRNAETPHLVP--HAPARYVSSLS--PFIST---------PRSVNH--TAAFGRHQQTRSISVDAVKPSDTFPRRHNSATPDEQTHMAKFCGFDHIDSLIDATVPKSIRLDSMKFSKFDAGLTESQMIQHMVDLAS 143 The following BLAST results are available for this feature:
BLAST of CX296715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296715 ID=CX296715; Name=CX296715; organism=Citrus clementina; type=EST; length=700bpback to top |