CX296757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 2.266e-102 Identity = 158/162 (97.53%), Postives = 161/162 (99.38%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267 HSP 2 Score: 61.6178 bits (148), Expect = 2.266e-102 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 80 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 111
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 2.266e-102 Identity = 156/162 (96.30%), Postives = 161/162 (99.38%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 61.6178 bits (148), Expect = 2.266e-102 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 80 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 111
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 2.956e-102 Identity = 157/162 (96.91%), Postives = 161/162 (99.38%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 61.6178 bits (148), Expect = 2.956e-102 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 80 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 111
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 3.856e-102 Identity = 157/162 (96.91%), Postives = 162/162 (100.00%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 113 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274 HSP 2 Score: 59.6918 bits (143), Expect = 3.856e-102 Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPE FAKNRELEVIHCR +G+ Sbjct: 87 GWDTAGLSADPENFAKNRELEVIHCRWAMLGA 118
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 3.857e-102 Identity = 156/162 (96.30%), Postives = 161/162 (99.38%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 104 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265 HSP 2 Score: 61.6178 bits (148), Expect = 3.857e-102 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 78 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 109
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 6.565e-102 Identity = 157/162 (96.91%), Postives = 161/162 (99.38%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 104 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265 HSP 2 Score: 61.6178 bits (148), Expect = 6.565e-102 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 78 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 109
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 6.565e-102 Identity = 156/162 (96.30%), Postives = 161/162 (99.38%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 105 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266 HSP 2 Score: 61.6178 bits (148), Expect = 6.565e-102 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 79 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 110
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 1.117e-101 Identity = 156/162 (96.30%), Postives = 160/162 (98.77%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPEL ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 105 WAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266 HSP 2 Score: 61.6178 bits (148), Expect = 1.117e-101 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 79 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 110
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 1.458e-101 Identity = 156/162 (96.30%), Postives = 160/162 (98.77%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267 HSP 2 Score: 61.6178 bits (148), Expect = 1.458e-101 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 80 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 111
BLAST of CX296757 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 1.458e-101 Identity = 155/162 (95.68%), Postives = 160/162 (98.77%), Query Frame = 3 Query: 84 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 569 WAMLGALGCVFPEL ARNG+KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 106 WAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267 HSP 2 Score: 61.6178 bits (148), Expect = 1.458e-101 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 2 Query: 5 GWDTAGLSADPETFAKNRELEVIHCRMGHVGS 100 GWDTAGLSADPETFAKNRELEVIHCR +G+ Sbjct: 80 GWDTAGLSADPETFAKNRELEVIHCRWAMLGA 111 The following BLAST results are available for this feature:
BLAST of CX296757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296757 ID=CX296757; Name=CX296757; organism=Citrus clementina; type=EST; length=691bpback to top |