CX296763
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 7.741e-72 Identity = 141/171 (82.46%), Postives = 147/171 (85.96%), Query Frame = -2 Query: 268 IDEHIGCAMS----D*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 768 IDEHIGCAMS D ++ H + ETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCN KAI SLQEQ+NKDLTLQEAETIALSILKQVMEEKVTPNNVDIA+VAPTYHLYTPSEVEAVI+RL Sbjct: 70 IDEHIGCAMSGLIADARTLVEHA---RVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 237
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.907e-70 Identity = 138/171 (80.70%), Postives = 146/171 (85.38%), Query Frame = -2 Query: 268 IDEHIGCAMS----D*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 768 IDEHIGCAMS D ++ H + ETQNHRFSYGEPMTVESTTQA+CDLALRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAI SLQEQYNK+LTLQEAETIALSILKQVMEEKVTPNNVDIA+V+P YHLYTP+EVEAVI RL Sbjct: 70 IDEHIGCAMSGLIADARTLVEHA---RVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL 237
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 7.246e-70 Identity = 136/171 (79.53%), Postives = 146/171 (85.38%), Query Frame = -2 Query: 268 IDEHIGCAMS----D*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 768 ID+HIGCAMS D ++ H + ETQNHRFSYGEPMTVESTTQALCDLALRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAI SLQEQ+NKD+TLQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI+RL Sbjct: 70 IDDHIGCAMSGLIADARTLVEHA---RVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISRL 237
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.753e-69 Identity = 136/171 (79.53%), Postives = 145/171 (84.80%), Query Frame = -2 Query: 268 IDEHIGCAMS----D*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 768 ID+HIGCAMS D ++ H + ETQNHRFSYGEPMTVESTTQALCDLALRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAI SLQEQ+NKDL+LQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI RL Sbjct: 70 IDDHIGCAMSGLIADARTLVEHA---RVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIARL 237
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.969e-39 Identity = 85/175 (48.57%), Postives = 119/175 (68.00%), Query Frame = -2 Query: 271 IDEHIGCAMS----D*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGD---EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT--YHLYTPSEVEAVINR 768 ID HIGCA+S D ++ H + +TQNHRF+Y EP +ESTTQ++CDLALRFGEG+ E MSRPFGV+LLIAG DE+GP LY+++PSGT+++ AKAI L ++++KD+TL+EAE + L +L+QVMEEK+ NV +A+V +H+Y E+ + R Sbjct: 70 IDSHIGCAISGLTADARTIIEHA---RVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAVAR 241
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.128e-38 Identity = 91/177 (51.41%), Postives = 116/177 (65.54%), Query Frame = -2 Query: 268 IDEHIGCAMS----D*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEG---DEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVINRL 768 ID H+ CA+S D ++ H + ETQNHRF+Y EPM VES Q++CDLALRFGE EE MSRPFGV+LLIAG DE GPSLYY+DPSGTF Q +AKAI +LQE+Y+K LT+ E + +AL+ LKQVMEE +T NV++A + + +Y E+ VI L Sbjct: 67 IDYHLICALSGLVADARTIIDHA---RIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVIQTL 240
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.247e-37 Identity = 89/172 (51.74%), Postives = 115/172 (66.86%), Query Frame = -2 Query: 277 IDEHIGCAMSD*LLMLVHC*T----CKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 768 ID HIGCAMS ++ T + ETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AI SLQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 70 IDAHIGCAMSG---LIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 156.762 bits (395), Expect = 1.247e-37 Identity = 89/172 (51.74%), Postives = 115/172 (66.86%), Query Frame = -2 Query: 277 IDEHIGCAMSD*LLMLVHC*T----CKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 768 ID HIGCAMS ++ T + ETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AI SLQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 70 IDAHIGCAMSG---LIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.247e-37 Identity = 89/172 (51.74%), Postives = 115/172 (66.86%), Query Frame = -2 Query: 277 IDEHIGCAMSD*LLMLVHC*T----CKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 768 ID HIGCAMS ++ T + ETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AI SLQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 70 IDAHIGCAMSG---LIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.779e-37 Identity = 89/172 (51.74%), Postives = 114/172 (66.28%), Query Frame = -2 Query: 277 IDEHIGCAMSD*LLMLVHC*T----CKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 768 ID HIGCAMS ++ T + ETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AI SLQE Y+K TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 70 IDAHIGCAMSG---LIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238 The following BLAST results are available for this feature:
BLAST of CX296763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296763 ID=CX296763; Name=CX296763; organism=Citrus clementina; type=EST; length=769bpback to top |