CX296765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 412.92 bits (1060), Expect = 7.786e-115 Identity = 207/227 (91.19%), Postives = 216/227 (95.15%), Query Frame = 2 Query: 2 SIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVFY 682 SIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDG+KE+TG+DR SLRQAVIFICATNRPDELDLEFVR GRIDRRLYIGLPDAKQRVQIF VHSAGK LAED++F +LVFRTVGFSGADIRNLVNE+ IMSVRKG S I QQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVS+EKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKE +SVFY Sbjct: 578 SIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSVFY 804
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.235e-36 Identity = 89/229 (38.86%), Postives = 134/229 (58.52%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ AP VF+DEIDA+ AG D R + T L+ ++DG +GV I + ATNRPD LD +RPGR DR++ + PD RV+I +VHS GK LA+DV+FE++ RT GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K VS EK+RL+A HEAGH ++ L P +D A ++P G+ ++ F Sbjct: 320 AKAKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDGFAGNSGV---------IVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER-IIAG---------PEKKNAVVSEEKRRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 528
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.606e-35 Identity = 88/229 (38.43%), Postives = 132/229 (57.64%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ AP VF+DEIDA+ AG D R + T L+ ++DG +GV I + ATNRPD LD +RPGR DR++ + PD RVQI VHS GK + +DV++E++ RT GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K VS EKKRL+A HEAGH ++ L P +D A ++P G+ ++ F Sbjct: 338 AKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQ-TINQLLTEMDGFSGNSGV---------IVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALER-IIAG---------PEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 546
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35 Identity = 87/229 (37.99%), Postives = 132/229 (57.64%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ AP VF+DEIDA+ AG D R + T L+ ++DG +GV I + ATNRPD LD +RPGR DR++ + PD RV+I VHS GK LA+DV+F+++ RT GF+G D++NL+NE+ I++ R+ +I + +I D L++ ++ G +K VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F Sbjct: 341 AKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDGFSGNSGV---------IVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALER-IIAG---------PEKKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 549
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35 Identity = 88/229 (38.43%), Postives = 132/229 (57.64%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ AP VF+DEIDA+ AG D R + T L+ ++DG +GV I + ATNRPD LD +RPGR DR++ + PD RV+I VHS GK L +DV+F+++ RT GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K VS EKKRL+A HEAGH ++ L P +D A ++P G+ ++ F Sbjct: 350 AKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQ-TINQLLTEMDGFSGNSGV---------IVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALER-IIAG---------PEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 558
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.739e-35 Identity = 87/229 (37.99%), Postives = 133/229 (58.08%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ AP VF+DEIDA+ AG D R + T L+ ++DG +GV I + ATNRPD LD +RPG+ DR++ + PD RV+I VHS GK LA+DV+F+++ RT GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F Sbjct: 318 AKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDGFSGNSGV---------IVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER-IIAG---------PEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 526
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 86/229 (37.55%), Postives = 132/229 (57.64%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ AP VF+DEIDA+ AG D R + T L+ ++DG +GV I + ATNRPD LD +RPGR DR++ + PD R++I VHS GK L +DV+FE++ RT G++GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F Sbjct: 341 AKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQ-TINQLLTEMDGFSGNSGV---------IVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALER-IIAG---------PEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 549
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.458e-33 Identity = 80/229 (34.93%), Postives = 130/229 (56.77%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ NAP VF+DEIDA+ AG D R + T L+ ++DG + TG+ I + ATNRPD LD +RPGR DR++ + PD R +I +VH+ GK L++DV+ +++ RT GF+GAD+ NL+NE+ I++ R+ ++I ++ D +D+ L +K + +S ++K L+A HEAGH ++ L P +D ++P G+ ++ F Sbjct: 249 AKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TLNQLLTEMDGFEGNTGI---------IIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVL----------AGPEKKNRVMSEKRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWF 457
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31 Identity = 79/228 (34.65%), Postives = 121/228 (53.07%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ NAP VFVDEIDA+ + + R T L+ ++DG + TG+ I I ATNR D LD +RPGR DR++ + +PD + R +I VH + K+ DV+ E + RT GFSGAD+ NL+NE+ I++ R+G + I ++I D +D+ + G ++T+ + K L+A HE GH + L P D L+P G+ ++ F Sbjct: 302 AKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGI---------IVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAGMEGTVMTDG-----------KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARGLTWF 509
BLAST of CX296765 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.981e-31 Identity = 80/228 (35.09%), Postives = 119/228 (52.19%), Query Frame = 2 Query: 8 ARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGVDRISLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKENCISVF 679 A+ NAP VFVDEIDA+ + + R T L+ ++DG + TGV I + ATNR D LD +RPGR DR++ + +PD K R I VHS K+ V+ E + RT GFSGAD+ NL+NE+ I++ R+G + I ++I D +D+ + G ++T+ + K L+A HE GH + L P D L+P G+ ++ F Sbjct: 308 AKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGV---------IVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDG-----------KSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGLTWF 515 The following BLAST results are available for this feature:
BLAST of CX296765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296765 ID=CX296765; Name=CX296765; organism=Citrus clementina; type=EST; length=684bpback to top |