CX296782

Overview
NameCX296782
Unique NameCX296782
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296782_ssr61 microsatellite CX296782_ssr61:61..70. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1004 contig Ccv1_Contig1004:38..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.787e-36
Identity = 78/174 (44.83%), Postives = 107/174 (61.49%), Query Frame = -3
Query:  213 HPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEV-MGAFASKGEEQEK-AAKARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGFRKILTGS 728
            +P +KK+PV VHN +P+AESL+I+EYIDE WK NP+LP DPY+RA ARFW+KF D+K V  V    F    +E+EK   +  E L+ LE  L+ K FFGG++ G +DIA  +I  W  I +EIAG+ L  +E  P+L  W   FL  P +   +P    L  + K   + L+ S
Sbjct:   51 NPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESLSAS 224          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.436e-36
Identity = 75/160 (46.88%), Postives = 103/160 (64.38%), Query Frame = -3
Query:  252 HPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKA-AKARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELL 728
            +P YKK+PVL+HNGKP+ ES++I+EYIDE ++   +LP+DPY+RA ARFWAKF D+K V  V+  F  KGEEQEK   +  E LK+L+  L+ K FF GDK GF DIA   +G W  + EE  G  L+ +E  P  + W + ++    +   +P   ELL
Sbjct:   47 NPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELL 205          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.439e-35
Identity = 75/160 (46.88%), Postives = 105/160 (65.62%), Query Frame = -3
Query:  252 HPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKA-AKARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELL 728
            +P +KK+PVL+HNGKP+ ES++I+EYIDE ++   +LP+DPY+RA ARFW+KF  +K V  V+  F  KGEEQEK   +  E LK+L+  L+ K FF GDK GF DIA   +G W  + EE  GV L+ +E  P  + W + ++    +K  +PS  ELL
Sbjct:   47 NPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELL 205          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.455e-35
Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = -3
Query:  252 HPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEK-AAKARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELL 728
            +P +KK+PVL+HNGK + ES++I+EYIDE ++   +LP+DPY+RA ARFWAKF D+K VP V+  F  KGEEQEK   +  E LK+L+  L+ K FF GDK GF DIA   +  W  + EE +GV L+ +E  P    W   ++    IK  +P   ELL
Sbjct:   47 NPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK-VPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELL 205          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 73/175 (41.71%), Postives = 101/175 (57.71%), Query Frame = -3
Query:  246 AIHPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKC--VPEVMGAFASKGEEQEKAAKARENLKMLERALEGKPFFGGDKIGFLDIAV----------GWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEH 734
            A++P +KK+PVLVHNGK + ES +I+EYIDE W QNP+LP+DPYER+ ARF+AK  DE+   V  +  A A +   +  A + RE +  LE+ L GK +FGG  +GFLD             GW GI         G+ +I  E  P    W+ N  +V ++K C+P   E +EH
Sbjct:   48 ALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGI---------GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEH 213          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.296e-30
Identity = 68/143 (47.55%), Postives = 97/143 (67.83%), Query Frame = -3
Query:  303 HPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKA-AKARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNF 728
            +P +KKIPVL+HNGK + ES++I+EYIDEA++   +LP+DPY+RA ARFWAK+ ++K    V  +F SKGEEQEKA  +A E LK+L+   + K  F GDK GF DI      ++  I+EE++G+ L  +E  P   AW + +
Sbjct:   47 NPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGA-AVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEY 188          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 73/171 (42.69%), Postives = 101/171 (59.06%), Query Frame = -3
Query:  228 IHPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN--PLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGFRK 731
            ++P +KKIPVL+HNGKP+ ES++ +EYI+E WK     LLP DPY+RA ARFWA + D+K        +A+KGEEQE A K   E LK+LE AL  +P+FGG+  GF+DIA+     W    E     S  +AE  P   AW    ++   +   +P   ++LE  K  R+
Sbjct:   48 MNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFS-TEAE-CPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQ 216          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.648e-29
Identity = 73/171 (42.69%), Postives = 100/171 (58.48%), Query Frame = -3
Query:  228 IHPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNP--LLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGFRK 731
            ++P +KKIPVL+HNGKP+ ES++ +EYI+E WK     LLP DPY+RA ARFWA + D+K        + +KGEEQE A K   E LK+LE AL  KP+FGG+  GF+DIA+     W    E     S  +AE  P   AW    ++   +   +P   ++LE  K  R+
Sbjct:   48 MNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFS-TEAE-CPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQ 216          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.225e-28
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = -3
Query:  255 IHPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN-PLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAKA-RENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHEL 731
            ++P +KKIP+L+HN K + ESL I+EYIDE W    PLLP DPYER+ ARFWA + D+K        ++ KGE+QE+A K   E LK LE  L  K +FGGD +GF+D+A+     W    E  A  S I+AE  P L  W    +E   +   +P  H++
Sbjct:   48 MNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFS-IEAE-CPKLVVWAKTCMESESVSKSLPHPHKI 206          
BLAST of CX296782 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28
Identity = 70/163 (42.94%), Postives = 98/163 (60.12%), Query Frame = -3
Query:  249 IHPGYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN-PLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAKA-RENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLE 731
            ++P +KKIP+L+HNGKP+ ESL I+EYIDE W +  PLLP DPY+R+ ARFWA + D K        ++ KGE+QE+A K   E  K LE  L  K +FGGD +GF+D+A+     W    E  A  S I+AE   L+  W  N +E   +   +P  H++ +
Sbjct:   48 MNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFS-IEAECRKLV-VW-QNCMENERVSKSLPHPHKIYD 207          
The following BLAST results are available for this feature:
BLAST of CX296782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX6_SOYBN3.787e-3644.83Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_TOBAC8.436e-3646.88Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC1.439e-3546.88Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC2.455e-3547.50Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH4.790e-3141.71Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_SOLTU5.296e-3047.55Probable glutathione S-transferase OS=Solanum tube... [more]
GSTXC_TOBAC4.484e-2942.69Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX4_TOBAC7.648e-2942.69Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC2.225e-2843.48Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL4.957e-2842.94Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionC05802G06SK FerrChloL1 Citrus clementina cDNA clone C05802G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296782 ID=CX296782; Name=CX296782; organism=Citrus clementina; type=EST; length=748bp
AGATTCGGCCGAGGCCTCCTGCCGAATTCGGCACGAGGTAACAATAATGT
ACCATATATGATATATATATAGTCTAGAAGACATTCATACAAACCTATGA
AGGATCATGCCTTATTTATGATAATATTTAGTCTAAAAGCAGTATTTATA
AATCATATTAAGAAACCTTCATGCATGGGCAACCGCTGATGATGGTAGAG
ACTTCAAGTTGATGAACCTGTCAAGATCTTGCGGAAGCCTTTATTGTGCT
CAAGCAATTCGTGCCAAGATGGTATGCATGCTTTGATAACAGGAACTTCA
AGAAAATTGTTCAACCAAGCAGTAAGCAAAGGCATCGTCTCTGCATCAAT
CAGGCTGACACCTGCAATTTCCTCAACAATTCGACCCCAGATTCCAATCC
ACCCCACAGCAATGTCCAGAAAGCCTATCTTGTCACCACCAAAAAAGGGC
TTCCCCTCCAGAGCCCTTTCCAGCATCTTCAGATTCTCTCGAGCTTTTGC
AGCTTTCTCTTGTTCCTCCCCTTTTGAGGCAAATGCTCCCATGACTTCAG
GTACACACTTCTCATCAAAGAATTTTGCCCAGAAACGTGCATTGGCCCGT
TCGTAAGGATCTTCTGGGAGGAGAGGATTTTGTTTCCACGCTTCATCAAT
GTATTCGATGATCAGTAGTGATTCTGCCAATGGTTTCCCATTGTGTACAA
GAACTGGAATCTTCTTATAACCCGGATGTATCGCACAGCAAGGGACTC
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