CX296862

Overview
NameCX296862
Unique NameCX296862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296862_ssr134 microsatellite CX296862_ssr134:134..145. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.134e-58
Identity = 111/183 (60.66%), Postives = 135/183 (73.77%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            NPR+MKK QAEIRN I NK R++  D D+L+YLKMVIKET RLHPP PLL+ RD +  F++NGY I  KT + VN WAIGRD   W+ PE F+PERF D  +D KGQ+FE L FGSGRRICPG+ +G  M E  LAN+LY FDWKLP G   +  +++MEEA G  LT+SKK+ L+LVPV YL
Sbjct:  320 NPRVMKKVQAEIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLLPRDVITEFEINGYTIPAKTRLHVNVWAIGRDPDTWKDPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVE--DIDMEEAPG--LTVSKKSELVLVPVKYL 498          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.299e-55
Identity = 106/183 (57.92%), Postives = 130/183 (71.04%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            NPR+MKK Q+EIRN IG K  +   DIDQL YLKMVI ET RLHPPAPLL+ R+ +  F++NGY I  KT + VN W IGRD   W+ PEEF+PERF++  +D KGQ+FE LPFGSGRR+CP + +G  M E  LANLLY FDWKLP G   +  +++MEE+ G  L  SKK  L+LVP  YL
Sbjct:  320 NPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVE--DIDMEESPG--LNASKKNELVLVPRKYL 498          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.299e-55
Identity = 111/183 (60.66%), Postives = 135/183 (73.77%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIG-NKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NPR+MKK Q EIR+ IG  K R+ E D+ +LQYLK+VIKETLRLHP APLL+ R+T+   K+ GYDI  KTL+ V+AW++GRD KYW++PEEF PERFID PVD KG  FE+LPFGSGRR CPG+   +   EL L NLLY FDWKLP    E+  +MNMEE+  V  T+ KK PL L+PV Y
Sbjct:  324 NPRVMKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLP----EEMKDMNMEESGDV--TIVKKVPLELLPVLY 500          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 2.215e-55
Identity = 105/183 (57.38%), Postives = 133/183 (72.68%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            NPR+MKK Q+EIRN + NK  +T  DID L YLKMVIKET RLHPP PLL+ R+ +  F++NGY I PKTL+ VN WAIGRD   W+  + F PERF+D  +D KGQ+FE LPFGSGRRICPG+ +G  M E  LAN+LY FDW++P+G   +  +++MEE+ G  L + KK  L+LVPV YL
Sbjct:  320 NPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVE--DIDMEESPG--LAVGKKNELLLVPVKYL 498          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.445e-55
Identity = 106/183 (57.92%), Postives = 131/183 (71.58%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            NPR+MKK Q+EIR+ I NK R++  D D+L+YLKMVIKET RLHP  PLLI R+ +  F++NGY I  KT + VN WAIGRD   W+ PE F+PERF D  +D KGQ FE LPFG GRR+CP + +G  M E  LANLLY FDWKLP G + D  +++MEEA G  LT++KK  LILVP  +L
Sbjct:  320 NPRVMKKVQSEIRSQIKNKERISFDDTDKLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMKVD--DIDMEEAPG--LTVNKKNELILVPTKFL 498          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.436e-54
Identity = 111/182 (60.99%), Postives = 135/182 (74.18%), Query Frame = -3
Query:  184 NPRLMKKAQAEIRNHIG--NKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 723
            NPR+MKKAQ EIR  IG   K R+ E D+D+LQYLK+VIKETLRLHPPAPLL+ R+T+   K+ GYDI  KT++ VNAW+IGR+ + WE+PEEF PERFID P+D KG  FE LPFGSGR+ICPGI  G+   EL L NLLY FDW+L    EED  +++MEEA     T+ KK PL LVP+
Sbjct:  323 NPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRL---AEED-KDIDMEEAG--DATIVKKVPLELVPI 498          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.875e-54
Identity = 109/182 (59.89%), Postives = 133/182 (73.08%), Query Frame = -3
Query:  184 NPRLMKKAQAEIRNHIGNK--GRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 723
            NPR+MKKAQ EIR  IG K  GR+ E D+D+LQYLK+V+KETLRLHP APLL+ R+T+   K+ GYDI  K  + VNAW+IGRD + W++PEEF PERFID PVD KG  FE LPFGSGRRICPGI + +   EL L NLLY FDW +P  +++    M+MEEA    LT+ KK PL L+PV
Sbjct:  324 NPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKD----MDMEEAG--DLTVDKKVPLELLPV 499          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.456e-54
Identity = 109/186 (58.60%), Postives = 133/186 (71.51%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIG--NKGRVTEAD-IDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            NPR+MKK Q+EIR  IG  NK R+   D I+ L YL MVIKET RLHP APLL+ R+ +  FK+NGY I PKT + VN WAIGRD + W+ PEEF+PERF+D  +DVKGQD+E LPFGSGRRICP + +G+   E  LANLLY FDWKLP G   +  ++ M+EA+G  LT  KK  L+LVPV  L
Sbjct:  320 NPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVE--DIYMDEASG--LTSHKKHDLLLVPVKSL 501          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.126e-54
Identity = 109/182 (59.89%), Postives = 135/182 (74.18%), Query Frame = -3
Query:  184 NPRLMKKAQAEIRNHIGNKG--RVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 723
            NPR+MKK Q EIR  IG K   ++ E D+D+LQYLK+V+KETLRLHP APLL+ R+T+ + K+ GY+I  KT++ VN W+IGRD K+W++PEEF PERFID P+D KG  FE LPFGSGRRICPGI   +   EL L NLLY FDW+LP   EED  +++MEEA  V  T+ KK PL LVPV
Sbjct:  320 NPRVMKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLP---EED-KDLDMEEAGDV--TIIKKVPLKLVPV 495          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.306e-54
Identity = 103/183 (56.28%), Postives = 129/183 (70.49%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            NPR+MKK Q+EIRN IG K  +T  DIDQL YLKMVI ET RLHPP+P LI R  +  F++N Y I  KT + VN WAIGRD   W+ PEEF+PERF++  +D KGQ FE LPFGSGRR+CP + +G  M E  LAN+LY FDWK+P G   +  ++++EE+ G  L  SKK  L+LVP+ YL
Sbjct:  320 NPRVMKKVQSEIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAE--DIDLEESPG--LNASKKNELVLVPLKYL 498          
The following BLAST results are available for this feature:
BLAST of CX296862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
C71BQ_ARATH8.134e-5860.66Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH1.299e-5557.92Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH1.299e-5560.66Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH2.215e-5557.38Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BV_ARATH6.445e-5557.92Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH1.436e-5460.99Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71B4_ARATH1.875e-5459.89Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BA_ARATH5.456e-5458.60Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH7.126e-5459.89Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH9.306e-5456.28Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803F07SK FerrChloL1 Citrus clementina cDNA clone C05803F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296862 ID=CX296862; Name=CX296862; organism=Citrus clementina; type=EST; length=761bp
TTTTTTTTTTACGGCGAATCCATACATAATTTAGGTGATGATAATACATT
ATCCTCAAATACATGATTACAAGTGATTACATTACAATCAACCACAACTT
GTACAGGAAGTTGAGGAAGTTACAACAGAGCAATGTTGTTGTTGTCTTTC
ATTTTTCTGATGGCTATGCTACTGGAGGTAATTGACTGGCACAAGGATAA
GAGGCGTCTTTTTAGAGAGAGTGAGAGACACACCAGTTGCCTCCTCCATG
TTCATGTTAACACAATCCTCCTCCCTTCCATTCGGCAATTTCCAATCAAA
ACAATACAAGAGATTTGCAAGCGCAAGCTCCGACATTATTAATCCCAAAT
TAATCCCAGGACAAATTCTTCGGCCGGATCCAAATGGTAAATATTCGAAA
TCTTGTCCTTTAACATCAACCGGCTTATCAATAAACCTTTCTGGGATGAA
TTCTTCAGGACTCTCCCAGTACTTTGAATCTCTTCCAATTGCCCAGGCAT
TCACTTGGATCAACGTTTTGGGATAAATGTCATAACCATTAACTTTGAAA
CGATACAGGGTATCTCTCGCAATTAATAGTGGGGCAGGAGGGTGCAGTCT
CAGAGTTTCCTTGATCACCATCTTCAGGTACTGAAGTTGATCAATATCGG
CTTCGGTAACTCTTCCTTTGTTTCCGATATGATTTCTGATTTCAGCTTGT
GCTTTTTTCATCAATCTTGGATTCTACAGAGCTCTGCCATTGCCCAATCA
CCGTAATGCGC
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