CX296869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.168e-79 Identity = 146/242 (60.33%), Postives = 179/242 (73.97%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAPSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755 H+S PEPIVHRDLKPGNILL+RNYVSKI DVGLAKL++D PDN+T YR ++LAGTLHY+DPEYHRTGTIRPKSDLYAFG+IILQLLT+ P+G++ VE+A+K G+ ++LDKS+TDWPLAETEELA I LKC+ RCRDRPDL +EV+PVL++L + A++ VK E SN+ APSH+FCPIL+ E+ME+P IAADGFTYE +AI AW Sbjct: 553 HSSKPEPIVHRDLKPGNILLNRNYVSKIADVGLAKLVTDVAPDNVTMYRNSVLAGTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTARNPSGIVPAVENAVKKGTLTEMLDKSVTDWPLAETEELARIGLKCAEFRCRDRPDLKSEVIPVLKRLVETANSKVKKEGSNLRAPSHYFCPILR------------------------------------EIMEEPEIAADGFTYERKAILAW 758
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.951e-52 Identity = 108/249 (43.37%), Postives = 150/249 (60.24%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKN--GSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVY-----APSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755 H + P PIVHRDLKP NILLDRN VSKIGDVGL+K+++ T + ET GT Y+DPEY RTG + P+SD+YAFG+I+LQL+T+ G+ +E A+++ G F +ILDK+ DWP+ E +E+ I L+C+ +R RDRPDL E++PVL +LK+VA + + N+ AP+HF+CPI + +VME+P +A+DG+TYE RAIK W Sbjct: 546 HTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRCAEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCPITK------------------------------------DVMENPCVASDGYTYEKRAIKEW 758
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.585e-52 Identity = 111/248 (44.76%), Postives = 151/248 (60.89%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLI--SDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKNGS---FADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVAD-ACVKLESSNVYAPSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755 H S P PI+HRDLKP NILL+ N+VSK+GDVGL+ +I +D + T Y++T GTL Y+DPEY RTG I PKSD+YAFG+IILQLLT + VE+A++N + ILD+ +WP+ ET +LA +AL+C+ LR +DRPDL+ +++PVL LK VAD A L ++ PSHFFCP+L+ +VM++P IAADG+TY+ RAI+ W Sbjct: 571 HKSKPTPIIHRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRTGRISPKSDVYAFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEETRQLAALALQCTELRSKDRPDLEDQILPVLESLKKVADKARNSLSAAPSQPPSHFFCPLLK------------------------------------DVMKEPCIAADGYTYDRRAIEEW 782
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.675e-47 Identity = 103/244 (42.21%), Postives = 140/244 (57.38%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI-KNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYA-PSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755 H S P PI+HRDLKPGNILLD N+VSK+GDVGL+ +++ + T +++T GTL Y+DPEY RTG I PKSD+Y+ GV+ILQL+T+ + VE AI + F ILDK WP+++T ELA + L C+ +R RDRPDL +++P L +L+ VAD L S PSHF CP+L+ VM +P +AADG+TY+ AI+ W Sbjct: 601 HKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVADKAQNLLSRTPSGPPSHFICPLLK------------------------------------GVMNEPCVAADGYTYDREAIEEW 808
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.188e-47 Identity = 104/245 (42.45%), Postives = 142/245 (57.96%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLIS-DAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI-KNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVAD-ACVKLESSNVYAPSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755 H S P+PI+HRDLKP NILLD N+VSK+GDVGL+ ++ D + T Y++T GTL Y+DPEY RTG I KSD+Y+FG+I+LQLLT+ + VESA+ N F ILD+ +WP+ ET ELA +AL C+ LR +DRPDL +++P L LK VA+ A + P+HF CP+L+ +VM +P +AADG+TY+ AI+ W Sbjct: 591 HKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAIALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQILPALENLKKVAEKARNSFSGVSTQPPTHFICPLLK------------------------------------DVMNEPCVAADGYTYDRHAIEEW 799
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36 Identity = 89/245 (36.33%), Postives = 127/245 (51.84%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKL---ESSNVYAPSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755 H++ +VH DLKP NILLD N VSK+ D G L+ N ++ T + GT+ Y+DPE +G + PKSD+Y+FG+I+L+LLT + +V+ A+ NG+ D+LD DWP + E+LA +AL+C +RPDL TEV VL ++ + + + AP +F CPI Q EVM+DP++AADGFTYE AI+AW Sbjct: 592 HSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHP----NGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARLALRCCETVSENRPDLGTEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFICPIFQ------------------------------------EVMQDPHVAADGFTYEAEAIRAW 796
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.129e-27 Identity = 83/243 (34.16%), Postives = 119/243 (48.97%), Query Frame = 3 Query: 51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYA--------PSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755 I+H +LKP ILLD N V+KI D G+++LI D + +DP Y + + +SD+YAFG+I+LQLLT +G+L V+ A++N + + +LD S DWP+A ++LA +A++C +RPDL VLR + + V ++ YA PSH+ CPI Q EVM+DP IAADGFTYE AI+ W Sbjct: 577 IIHGNLKPSKILLDSNLVTKINDYGISQLIPIDGLDKSDPH-----------VDPHYFVSREMTLESDIYAFGIILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMNRPDLAV----VLRFIDRMKAPEVPSSETSSYANQNVPRRPPSHYLCPIFQ------------------------------------EVMKDPLIAADGFTYEAEAIREW 768
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS----CL-----PNGVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500 H+S PI+HRD+K NILLD+N +K+ D G ++LI E TI+ GTL Y+DPEY+ TG + KSD+Y+FGV++++LL+ C P ++ SA KN F +I+D + + E +E A IA +C+ L +RP + EV L L+ Sbjct: 518 HSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMD-----KEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRM-KEVAAELEALR 678
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19 Identity = 54/162 (33.33%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNIT-EYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP----NGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500 H PI HRD+K NILLD + +K+ D GL++L + I+ ++ T++ GT Y+DPEY T + KSD+Y+ GV++L+L T P ++ ++ A ++GS +DK ++ P E+ A +AL+C CR+ D + V+R+L+ Sbjct: 738 HTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIAYESGSILSTVDKRMSSVPDECLEKFATLALRC----CREETDARPSMAEVVRELE 895
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 65/186 (34.95%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS----CLPNGVLLK------VESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAPSH 557 H+S PI+HRD+K NILLD N +K+ D G +KLI E T++ GTL Y+DPEY+ TG + KSD+Y+FGV++++LL+ C K V + +N I D+ + + L E +E A IA +C+ L +RP ++K+VA KLE+ V H Sbjct: 529 HSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMD-----KEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERP-----------RMKEVA---AKLEALRVEKTKH 695 The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bpback to top |