CX297509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 5.052e-85 Identity = 154/225 (68.44%), Postives = 178/225 (79.11%), Query Frame = 2 Query: 29 RSHRVVGDAADHDMAGGSSPTC----CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPHAGAKMTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 RSHR G A G + CWA LP ELLRE+L +IE ++ WPSRR VVACAGVCRSWR ITKEIV+VPE SG LTFPIS+KQPGPRD L+CFI+RNR+TQTY+LY+ LT ALADDGKFLLAARKCR+ TCTDY+ISL DMSKGS+TY+GKLRSNFLGTKF VYD PP+ GA +++SRS R+ L QVSPR+P GNY V+HISYELNVLG+RG Sbjct: 25 RSHRGGGGAPRVAAVGPAEAAAMQQSCWAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGAVVSKSRSARVVGLNQVSPRVPAGNYPVSHISYELNVLGARG 249
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 7.549e-81 Identity = 149/222 (67.12%), Postives = 181/222 (81.53%), Query Frame = 2 Query: 29 RSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALA-DDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPHAGAKMTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 RS RVV D + A S CWA++P ELLR++L +IE ++ WPSR++VV+CAGVCR+WR+I KEIV+VPELS LTFPIS+KQPGPR L+QC+I RNRS QTY+LYL L A + DDGKFLLAA++ RR TCTDYIISL+ DD+S+GS+TY+GKLRSNFLGTKF VYD QP + G ++TR+RS+RL +LKQVSPRIP GNY VAHISYELNVLGSRG Sbjct: 32 RSQRVVQDTSVPVDAFKQS---CWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAHISYELNVLGSRG 250
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 8.637e-77 Identity = 132/199 (66.33%), Postives = 162/199 (81.41%), Query Frame = 2 Query: 95 CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPHAGAKMTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 CW LP ELLRE+LA++E ++ WP RR VVACAGVCRSWR I +EIV+ PE SG LTFPIS+KQPGPRD ++CFI RNR+TQTY+LY+ LT+AL DDGKFLLAARKCRR TCT+Y+ISL +D+SK + +Y+GKLRSNFLGTKF +YD PP+AG +++ +S R+ +SPRIP GNY V+HISYELNVLGSRG Sbjct: 54 CWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYPVSHISYELNVLGSRG 252
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 5.598e-76 Identity = 149/225 (66.22%), Postives = 173/225 (76.89%), Query Frame = 2 Query: 20 MWRRSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPHAGAKMTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 M R HRVV AA SS W+ LP+ELLREIL ++E D WPSRR+VVACAGVCRSWR +TKEIV VPE S LTFPIS+KQ GPRD L+QCFIKRNR+TQ+YHLYL LT +L D+GKFLLAA K +RATCTDYIISL SDD+SK S+ YLG++RSNFLGTKF V+DG A AKM +SRS +N +VSPR+P G+Y +AHISYELNVLGSRG Sbjct: 10 MRSRPHRVVHAAAS---TANSSDPFSWSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTKFTVFDGSQTGA-AKMQKSRS---SNFIKVSPRVPQGSYPIAHISYELNVLGSRG 227
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.072e-74 Identity = 147/230 (63.91%), Postives = 170/230 (73.91%), Query Frame = 2 Query: 20 MWRRSHRVVGD---AADHDMAGGSSPTCCWANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQ--PPHAGAKMTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 M R HRVV D AA D SS W+ +P+ELLREIL ++EAAD WPSRRSVVACAGVCR WR + E V VPE+S LTFPIS+KQPGPRD L+QCFIKRNR TQ+YHLYL LTN+L DDGKFLLAA K + TCTDYIISL SDDMS+ S Y+GK+RSNFLGTKF V+DG P AK+ +SRS N +VS ++P G+Y VAHI+YELNVLGSRG Sbjct: 10 MRSRPHRVVHDLAAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTVFDGNLLPSTGAAKLRKSRS---YNPAKVSAKVPLGSYPVAHITYELNVLGSRG 236
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.519e-68 Identity = 124/223 (55.61%), Postives = 173/223 (77.58%), Query Frame = 2 Query: 29 RSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPHAGAKMTR-SRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 +S V + D D+ S WA+LP ELLR+++ ++EA++S WPSR+ VV+CA VC++WR++ KEIV PE G LTFP+S+KQPGPRD ++QCFIKR++S TYHLYL L+ A LAD GKFLL+A++ R+ TCT+Y+IS+ +D++S+ SSTY+GKLRSNFLGTKFI+YD QP + GA + RS+R N K+VSP++P G+Y++A ++YELNVLG+RG Sbjct: 39 KSQSTVHELCDADLIIQESR---WASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSGSYNIAQVTYELNVLGTRG 258
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 6.859e-66 Identity = 120/226 (53.10%), Postives = 172/226 (76.11%), Query Frame = 2 Query: 29 RSHRVVGDAADHDMAGGSSP---TCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPHAGAKMTRS-RSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 RSH V + D A ++ + CWANLP ELLR+++ ++EA+++AWPSR++VVACA VCR+WR + +EIVK PE G +TFP+S+KQPGPR+ +QCFIKR++STQTY+LYL L++A L + GKFLL+A++ RATCT+Y I + +D+ S+ S+ Y+GKLRSN LGTKF++YD QPP A +++S +++R ++VSP+ P YS+A +SYELNVLG+RG Sbjct: 33 RSHSAVHELRDGHAAAAAADVVQSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPSSTYSIAQVSYELNVLGTRG 258
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.996e-65 Identity = 119/203 (58.62%), Postives = 160/203 (78.82%), Query Frame = 2 Query: 98 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPH----AGAKMTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 WANLP ELLR+++ ++E ++S WP+RR VVACA VCRSWR + KEIV+ PELSG +TFP+S+KQPGPRD +QCFIKR++S TYHLYL L+ A L ++GKFLL+A++ RR T T+Y+IS+H+D +S+ S+TY+GK+RSNFLGTKFI+YD QP + A A S R + K+VSP++P G+Y +A +SYELNVLG+RG Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYS-KRVSPKVPSGSYKIAQVSYELNVLGTRG 258
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.404e-65 Identity = 113/200 (56.50%), Postives = 163/200 (81.50%), Query Frame = 2 Query: 98 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPHAGAK-MTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 WANLP LLR+++ K++ ++S WP+R+ VVACAGVC++WR + K+IVK PE SG LTFP+S+KQPGPRD ++QC+IKR++S TYHLYLSL+ A L + GKFLL+A++ RRAT T+Y+IS+ +D++S+ SSTY+GKL+SNFLGTKFIVYD P + ++ ++ +R N K+VSP++P G+Y++A ++YELN+LG+RG Sbjct: 55 WANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKVPSGSYNIAQVTYELNLLGTRG 254
BLAST of CX297509 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.404e-65 Identity = 116/200 (58.00%), Postives = 162/200 (81.00%), Query Frame = 2 Query: 98 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNFLGTKFIVYDGQPPH-AGAKMTRSRSTRLANLKQVSPRIPFGNYSVAHISYELNVLGSRG 691 W LP ELLR+++ ++E +S WPSR+ VVACA VCR+WR+I K+IV+ PE+ G LTFP+S+KQPGPRD L+QCFIKR++S TY+LYL L+ A L+++GKFLLAA++ RRAT T+YIIS+ S ++S+ S+ Y+GK+RSNFLGTKF+VYD QPP+ AG+ M+ +R + ++VSP++P G+Y +AH+ YELNVLG+RG Sbjct: 59 WVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKLPTGSYPIAHVKYELNVLGTRG 258 The following BLAST results are available for this feature:
BLAST of CX297509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297509 ID=CX297509; Name=CX297509; organism=Citrus clementina; type=EST; length=693bpback to top |