CX297517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL35_EUPES (60S ribosomal protein L35 OS=Euphorbia esula GN=RPL35 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.954e-36 Identity = 81/101 (80.20%), Postives = 83/101 (82.18%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQAS 671 MARIKVHELRQK+K + RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ S Sbjct: 1 MARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQS 101
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL352_ARATH (60S ribosomal protein L35-2 OS=Arabidopsis thaliana GN=RPL35B PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36 Identity = 81/101 (80.20%), Postives = 83/101 (82.18%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQAS 671 MARIKVHELR+KSK D RVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQAS Sbjct: 1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL354_ARATH (60S ribosomal protein L35-4 OS=Arabidopsis thaliana GN=RPL35D PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.549e-35 Identity = 81/101 (80.20%), Postives = 82/101 (81.19%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQAS 671 MARIKVHELR KSK D RVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQAS Sbjct: 1 MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL351_ARATH (60S ribosomal protein L35-1 OS=Arabidopsis thaliana GN=RPL35A PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.689e-35 Identity = 80/101 (79.21%), Postives = 82/101 (81.19%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQAS 671 MARIKVHELR+KSK D RVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQAS Sbjct: 1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL353_ARATH (60S ribosomal protein L35-3 OS=Arabidopsis thaliana GN=RPL35C PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.312e-34 Identity = 80/101 (79.21%), Postives = 81/101 (80.20%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQAS 671 MARIKVHELR KSK D RVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQAS Sbjct: 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL35_RAT (60S ribosomal protein L35 OS=Rattus norvegicus GN=Rpl35 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 60/99 (60.61%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 665 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+ Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHE 99
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL35_MOUSE (60S ribosomal protein L35 OS=Mus musculus GN=Rpl35 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 60/99 (60.61%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 665 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+ Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHE 99
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL35_HIPCM (60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24 Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQAS 671 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ S Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVITQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEES 101
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL35_DANRE (60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24 Identity = 60/99 (60.61%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 665 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+ Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHE 99
BLAST of CX297517 vs. ExPASy Swiss-Prot
Match: RL35_XENTR (60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23 Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 369 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 665 MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHE 99 The following BLAST results are available for this feature:
BLAST of CX297517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297517 ID=CX297517; Name=CX297517; organism=Citrus clementina; type=EST; length=673bpback to top |