CX297525

Overview
NameCX297525
Unique NameCX297525
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length589
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6420 contig Ccv1_Contig6420:391..979. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297525 vs. ExPASy Swiss-Prot
Match: LGT_CITUN (Limonoid UDP-glucosyltransferase OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.584e-19
Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 2
Query:   32 NIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRL--RPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVELKHAARQAVAGGGSSDQNIQLFADEI 316
            ++ +GVPVI +PQW DQ T+A  + DVFK GLRL    +E+  +  +E+EKC+ E   GPK+   ++NA++ K  A +AVA GGSSD+NIQ F DE+
Sbjct:  368 SLASGVPVITFPQWGDQVTDAMYLCDVFKTGLRLCRGEAENRIISRDEVEKCLLEATAGPKAVALEENALKWKKEAEEAVADGGSSDRNIQAFVDEV 464          
BLAST of CX297525 vs. ExPASy Swiss-Prot
Match: IABG1_ARATH (Indole-3-acetate beta-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT75B1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.287e-18
Identity = 46/114 (40.35%), Postives = 74/114 (64.91%), Query Frame = 2
Query:   32 NIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVELKHAARQAVAGGGSSDQNIQLFADEILGNYSERGARCGENLASSM 373
            ++V GVPV+A+P WSDQPTNAKL+ + +K G+R+R ++DG V   E+ +C+E ++   KS   ++NA + K  A +A   GGSSD+N++ F ++I          CGE+L  ++
Sbjct:  358 SLVLGVPVVAFPMWSDQPTNAKLLEESWKTGVRVRENKDGLVERGEIRRCLEAVME-EKSVELRENAKKWKRLAMEAGREGGSSDKNMEAFVEDI----------CGESLIQNL 460          
BLAST of CX297525 vs. ExPASy Swiss-Prot
Match: Y1567_ARATH (Uncharacterized UDP-glucosyltransferase At1g05670 OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.655e-18
Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 2
Query:   44 GVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVELKHAARQAVAGGGSSDQNIQLF 304
            GVP+I  P W+DQPTNAK + DV+K+G+R++   DGFV  EE  + VEE++   + +  +KNA + K  A++AV+ GGSSD+NI  F
Sbjct:  362 GVPMIGMPHWADQPTNAKFMEDVWKVGVRVKADSDGFVRREEFVRRVEEVMEAEQGKEIRKNAEKWKVLAQEAVSEGGSSDKNINEF 448          
BLAST of CX297525 vs. ExPASy Swiss-Prot
Match: IABG2_ARATH (Indole-3-acetate beta-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT75B2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16
Identity = 39/95 (41.05%), Postives = 64/95 (67.37%), Query Frame = 2
Query:   32 NIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVELKHAARQAVAGGGSSDQNIQLFADEI 316
            ++V GVPV+A+P WSDQP NAKL+ +++K G+R+R + +G V   E+ +C+E ++   KS   ++NA + K  A +A   GGSSD+N++ F   +
Sbjct:  361 SLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIMRCLEAVMEA-KSVELRENAEKWKRLATEAGREGGSSDKNVEAFVKSL 454          
BLAST of CX297525 vs. ExPASy Swiss-Prot
Match: UGAGT_ARATH (Anthocyanin 5-O-glucosyltransferase OS=Arabidopsis thaliana GN=UGT75C1 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.062e-15
Identity = 40/95 (42.11%), Postives = 68/95 (71.58%), Query Frame = 2
Query:   32 NIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIIN-GPKSEYYKKNAVELKHAARQAVAGGGSSDQNIQLFADE 313
            ++ +GVPV+A+PQ++DQ T AKLV D ++IG++++  E+G V  EE+ +C+E++++ G ++E  ++NA + K  A  A A GG SD N++ F DE
Sbjct:  360 SLESGVPVVAFPQFADQCTTAKLVEDTWRIGVKVKVGEEGDVDGEEIRRCLEKVMSGGEEAEEMRENAEKWKAMAVDAAAEGGPSDLNLKGFVDE 454          
BLAST of CX297525 vs. ExPASy Swiss-Prot
Match: HTGT_ARATH (N-hydroxythioamide S-beta-glucosyltransferase OS=Arabidopsis thaliana GN=UGT74B1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.033e-11
Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = 2
Query:   44 GVPVIAYPQWSDQPTNAKLVADVFKIGLRLR-PSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVELKHAARQAVAGGGSSDQNIQLFADEI 316
            GVP++  PQWSDQ  +AK V +V+K+G R +  + +  V +EEL +C++ ++ G  S   ++++ + K  A +A++ GGSSD++I  F + +
Sbjct:  367 GVPMVGVPQWSDQMNDAKFVEEVWKVGYRAKEEAGEVIVKSEELVRCLKGVMEGESSVKIRESSKKWKDLAVKAMSEGGSSDRSINEFIESL 458          
The following BLAST results are available for this feature:
BLAST of CX297525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
LGT_CITUN1.584e-1948.45Limonoid UDP-glucosyltransferase OS=Citrus unshiu ... [more]
IABG1_ARATH2.287e-1840.35Indole-3-acetate beta-glucosyltransferase 1 OS=Ara... [more]
Y1567_ARATH6.655e-1848.28Uncharacterized UDP-glucosyltransferase At1g05670 ... [more]
IABG2_ARATH2.141e-1641.05Indole-3-acetate beta-glucosyltransferase 2 OS=Ara... [more]
UGAGT_ARATH1.062e-1542.11Anthocyanin 5-O-glucosyltransferase OS=Arabidopsis... [more]
HTGT_ARATH6.033e-1135.87N-hydroxythioamide S-beta-glucosyltransferase OS=A... [more]
back to top
Properties
Property NameValue
Genbank descriptionC06002D10SK RindPdig24 Citrus clementina cDNA clone C06002D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297525 ID=CX297525; Name=CX297525; organism=Citrus clementina; type=EST; length=589bp
GCAGGATTCGGCACGAGGGTTCGTTGCTGGAAACATCGTCGCCGGCGTGC
CAGTGATTGCATACCCTCAATGGAGCGATCAGCCAACAAATGCTAAACTC
GTTGCCGATGTTTTCAAGATAGGTCTAAGGCTTAGGCCCAGTGAAGATGG
CTTCGTTGGCAACGAGGAGTTGGAGAAATGTGTTGAAGAAATTATTAATG
GACCGAAATCGGAGTATTACAAGAAAAATGCAGTGGAATTGAAGCATGCG
GCAAGGCAGGCGGTGGCCGGAGGCGGTTCGTCGGACCAGAATATTCAGTT
GTTTGCTGATGAGATTCTTGGAAATTATAGTGAACGTGGGGCACGTTGTG
GAGAAAATTTGGCTTCATCAATGATAGGTTAATATTTATTTTCAATATTG
CTTGATGTAAAATGAAGTCATAAAAGTAGTACTACAAGAATAAAAAGGTT
GATGGTCCAAATAAACAAGTATTGCTACATAGTTCCATTGGCATTAATCA
ATAATTATTTGTAATTGCGAGCCATATTTCAACCAGAATTTGATAGTTTG
ATTAGTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top