CX297531

Overview
NameCX297531
Unique NameCX297531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15266 contig Ccv1_Contig15266:164..876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 2.882e-107
Identity = 187/215 (86.98%), Postives = 197/215 (91.63%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FLRGYLKIC+EVKERRLQLFKDYFV+ERKKLASTK+MSNE LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR+ELDT+LGPGHQITEPDT+KLPYL AV+KETLRLRMAIPLLVPHMNLHDAKLGG+D+PAESKILVNAWWLANNPA WK              +KVEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMSNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.095e-106
Identity = 186/215 (86.51%), Postives = 196/215 (91.16%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FLRGYLKIC+EVKERRLQLFKDYFV+ERKKLASTK+M NE LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR+ELDT+LGPGHQITEPDT+KLPYL AV+KETLRLRMAIPLLVPHMNLHDAKLGG+D+PAESKILVNAWWLANNPA WK              +KVEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMCNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.283e-104
Identity = 183/215 (85.12%), Postives = 192/215 (89.30%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FL+GYLKICKEVKERRL+LFKDYFV+ER KL STKS SNE LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKK+R+E+D VLGPGHQ+TEPD  KLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLANNPA WK+             S VEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLKGYLKICKEVKERRLKLFKDYFVDERMKLESTKSTSNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKVRDEIDRVLGPGHQVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 6.644e-104
Identity = 184/215 (85.58%), Postives = 193/215 (89.77%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FLRGYL+ICKEVKERRLQLFKDYFV+ERKK  STKSM N SLKCAIDHIL+AQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR+EL+TVLGPG QITEPDT+KLPYLQAVIKETLRLRMAIPL +PHMNLHDAKLGGYD+PAESKILVNAW+LANNP  WKK             SKVEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLRGYLRICKEVKERRLQLFKDYFVDERKKFGSTKSMDNNSLKCAIDHILEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 370.933 bits (951), Expect = 3.645e-102
Identity = 179/215 (83.26%), Postives = 189/215 (87.91%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS  NE LKCAIDHILDAQ KGEIN+DNVLYIVENINVAAIETTLWSIEWGIAELVNH EIQ KLR E+D VLGPGHQ+TEPD  KLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGG+D+PAESKILVNAWWLANNPA WKK             + VEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTYNEGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.761e-102
Identity = 180/215 (83.72%), Postives = 189/215 (87.91%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FL+GYLK+CKEVKE+R QLFKDYFV+ERKKL STKSM N  LKCAIDHILDA+ KGEINEDNVLYIVENINVAAIETTLWSIEW IAELVNHPEIQ KLR+EL + LGPG Q+TEPD HKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLANNP QWKK             SKVEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLKGYLKLCKEVKEKRFQLFKDYFVDERKKLGSTKSMDNNQLKCAIDHILDAKDKGEINEDNVLYIVENINVAAIETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.761e-102
Identity = 180/215 (83.72%), Postives = 190/215 (88.37%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FLRGYLK+ KEVKERRL+LFKDYFVEERKKL STKSM+ E+ KCAIDH+LDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHP+IQKKLR E+D VLGP HQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNL+DAKL GYD+PAESKILVNAWWLANNPA WK              S VEANGNDFRY+PFGVGRRSCP
Sbjct:  234 FLRGYLKLVKEVKERRLKLFKDYFVEERKKLTSTKSMTEENFKCAIDHVLDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 4.761e-102
Identity = 178/215 (82.79%), Postives = 190/215 (88.37%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS +NE LKCAIDHILDAQ KGEIN+DNVLYIVENINVAAIETTLWSIEWGIAELVNH +IQ K+R E+D VLGPGHQ+TEPD  KLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKL G+D+PAESKILVNAWWLANNPAQWKK             S VEANGNDFRYLPFGVGRRSCP
Sbjct:  233 FLKGYLKLCKEVKDRRLQLFKDYFVDERKKLGSTKSTTNEGLKCAIDHILDAQQKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQKIQNKVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCP 447          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.061e-101
Identity = 177/215 (82.33%), Postives = 190/215 (88.37%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FL+GYLKICKEVKE RL+LFKDYFV+ERK + STKS +NE LKCAIDHILDA+ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ+K+R+E+D VLG GHQ+TEPD  KLPYLQAV+KETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLANNPA WKK             S VEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLKGYLKICKEVKETRLKLFKDYFVDERKNIGSTKSTNNEGLKCAIDHILDAEKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCP 448          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.363e-101
Identity = 180/216 (83.33%), Postives = 191/216 (88.43%), Query Frame = 1
Query:    1 FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNES-LKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            FL+GYLKICKEVKE RL+LFKDYFV+ERKKL STKS +N + LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ+KLR+E+D VLG GHQ+TEPD  KLPYLQAV+KETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLANNPA WKK             S VEANGNDFRYLPFGVGRRSCP
Sbjct:  234 FLKGYLKICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCP 449          
The following BLAST results are available for this feature:
BLAST of CX297531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
TCMO_POPKI2.882e-10786.98Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_POPTM1.095e-10686.51Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_GLYEC2.283e-10485.12Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_CATRO6.644e-10485.58Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_PEA3.645e-10283.26Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_ZINEL4.761e-10283.72Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_RUTGR4.761e-10283.72Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_CICAR4.761e-10282.79Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_PHAAU1.061e-10182.33Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_SOYBN2.363e-10183.33Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]

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Properties
Property NameValue
Genbank descriptionC06002E04SK RindPdig24 Citrus clementina cDNA clone C06002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297531 ID=CX297531; Name=CX297531; organism=Citrus clementina; type=EST; length=712bp
TTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACT
CCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCA
CGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTG
GACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGT
TGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGT
GGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGC
AATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGA
CACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCC
TTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCC
AAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGC
GTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCA
GGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAAT
GACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTT
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