CX297532

Overview
NameCX297532
Unique NameCX297532
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK5_ARATH (Probable serine/threonine-protein kinase WNK5 OS=Arabidopsis thaliana GN=WNK5 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.129e-28
Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 2
Query:   38 SDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWK 295
            +D  ++TDM+ITG MN ED TIFL+VQI D DG  RNI FPF+I +DT  EVALEMVKELEITDW+PLEIA MIE EIS LVPNW+
Sbjct:  320 TDPTRTTDMSITGKMNSEDHTIFLQVQILDGDGHMRNIQFPFNILSDTPLEVALEMVKELEITDWDPLEIAAMIENEISLLVPNWR 405          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK8_ORYSJ (Probable serine/threonine-protein kinase WNK8 OS=Oryza sativa subsp. japonica GN=WNK8 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.580e-24
Identity = 64/114 (56.14%), Postives = 71/114 (62.28%), Query Frame = 2
Query:   50 KSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWKECGSPQFCHQHSFSYXXXXXXXXXXGIYHPFY 391
            K+T M ITG +N E DTIFLKVQI    G  RNIYFPFD+ NDTA EVA EMVKEL+I D EP EIA MIEQEI  LVP +K         QH +SY          G  +PFY
Sbjct:  333 KTTGMAITGKLNKEHDTIFLKVQIGG-GGNVRNIYFPFDVANDTAMEVATEMVKELDIADREPTEIAAMIEQEIVRLVPGYK---------QHEYSYADDDDDDDVNGQPNPFY 436          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK7_ORYSJ (Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica GN=WNK7 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.580e-24
Identity = 65/121 (53.72%), Postives = 73/121 (60.33%), Query Frame = 2
Query:   29 AVDSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWKECGSPQFCHQHSFSYXXXXXXXXXXGIYHPFY 391
            A  +   K+TDM ITG +N E DTIFLKVQI       RNIYFPFD+ NDTA EVA EMVKEL+I D EP EIA MIEQEI  LVP +K         QH +SY          G  +PFY
Sbjct:  327 AAPAPAAKTTDMAITGKLNKEHDTIFLKVQIGG-GRNVRNIYFPFDVANDTAMEVATEMVKELDIADREPTEIAAMIEQEIVRLVPGYK---------QHEYSYADDNDDDDVSGHPNPFY 437          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK4_ARATH (Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana GN=WNK4 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 75/205 (36.59%), Postives = 101/205 (49.27%), Query Frame = 2
Query:   41 DRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWKECGSPQFCHQHSFSYXXXXXXXXXXGIYHPFYXXXXXXXXXXXLPAFFTN-NANSPPSWLQQEDLLGNDDASSNGSVSSFKYSSWDYHSGNEDDSEFSHRAGEPLCIARATQKSTRFCPE 652
            D    T+M+I G +  ED+ I L+VQI   +G A N++FPFDI NDT+ +VA EMVKELEI DWEP+EIA+MI+  ISSLV +WK     +  H H                 H                A  +N  A     W+ Q+DL  +D+  S  S  S  YS+ +Y + +E  S+          +   T   TRFCPE
Sbjct:  309 DDELRTEMSIAGKLGAEDNKIDLEVQIAYDNGLANNVFFPFDIMNDTSIDVAKEMVKELEIIDWEPVEIAKMIDGAISSLVSDWKYEEDDETPHDHH---------------RHRTDSFHSSSSHASSSQASLSNYMARGLQDWV-QDDL--HDETYSQSSSHSGSYSNLNYIAVDEYSSQSP--------VMSRTHNMTRFCPE 487          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSJ (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. japonica GN=WNK1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 2
Query:   53 STDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWK------ECGSPQFCH 322
            + D+TI G  + ED +IFL+++I D DG  RNIYFPFDI  DTA  VA EMV EL+ITD E   IAEMI+ E+S+LVP+W+      E     +CH
Sbjct:  362 NVDITIKGRKS-EDGSIFLRLRIADNDGHVRNIYFPFDIEADTALSVATEMVAELDITDHEVTRIAEMIDGEVSALVPDWRPGPGIEESQDTTYCH 456          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSI (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 2
Query:   53 STDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWK------ECGSPQFCH 322
            + D+TI G  + ED +IFL+++I D DG  RNIYFPFDI  DTA  VA EMV EL+ITD E   IAEMI+ E+S+LVP+W+      E     +CH
Sbjct:  362 NVDITIKGRKS-EDGSIFLRLRIADNDGHVRNIYFPFDIEADTALSVATEMVAELDITDHEVTRIAEMIDGEVSALVPDWRPGPGIEESQDTTYCH 456          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK2_ARATH (Serine/threonine-protein kinase WNK2 OS=Arabidopsis thaliana GN=WNK2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.443e-17
Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 2
Query:   38 SDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWK 295
            +D     D++I G  N  DD IFL+++I+D +G+ RNIYFPF+   DTA  VA+EMV EL+IT+ +  +IAEMI+ EI++LVP+WK
Sbjct:  334 NDDEDHVDISIKGKRNG-DDGIFLRLRISDAEGRIRNIYFPFETAIDTAWSVAVEMVSELDITNQDVAKIAEMIDAEIAALVPDWK 418          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK9_ARATH (Probable serine/threonine-protein kinase WNK9 OS=Arabidopsis thaliana GN=WNK9 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 2
Query:   35 DSDRRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNW 292
            +  R  S D++I G      D +FL+++  +K+G  RNIYFPFDI  DTA  VA EMV+ELE+ D +  +IA MI+ EI+SLVPNW
Sbjct:  355 EDKRFGSVDISIKGKRRDNGDGLFLRLKTVNKEGCVRNIYFPFDIETDTAISVAREMVEELEMDDRDVTKIANMIDGEIASLVPNW 440          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK1_ARATH (Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana GN=WNK1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 2
Query:   53 STDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWKECGSPQF 316
            + D+TI G    +D  +FL+++I DK+G+ RNIYFPFDI  DTA  VA EMV EL++ D    +IA MI+ EISSLVP+W+    P+F
Sbjct:  388 NVDITIKGKRR-DDGGLFLRLRIADKEGRVRNIYFPFDIETDTALSVATEMVAELDMDDHGVTKIANMIDGEISSLVPSWRP--GPEF 472          
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK3_ARATH (Probable serine/threonine-protein kinase WNK3 OS=Arabidopsis thaliana GN=WNK3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 37/67 (55.22%), Postives = 53/67 (79.10%), Query Frame = 2
Query:   95 DTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLE-IAEMIEQEISSLVPNW 292
            +TIFLK++ITD  GQ RNI+FPF+I  DT+  VA+EMV+EL++TD + +  IA+MI+ EI S +P+W
Sbjct:  325 NTIFLKLRITDSKGQIRNIHFPFNIETDTSFSVAIEMVEELDLTDDQDISTIAKMIDTEIHSHIPDW 391          
The following BLAST results are available for this feature:
BLAST of CX297532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
WNK5_ARATH3.129e-2870.93Probable serine/threonine-protein kinase WNK5 OS=A... [more]
WNK8_ORYSJ3.580e-2456.14Probable serine/threonine-protein kinase WNK8 OS=O... [more]
WNK7_ORYSJ3.580e-2453.72Probable serine/threonine-protein kinase WNK7 OS=O... [more]
WNK4_ARATH1.504e-2236.59Probable serine/threonine-protein kinase WNK4 OS=A... [more]
WNK1_ORYSJ5.915e-1952.08Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK1_ORYSI5.915e-1952.08Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK2_ARATH9.443e-1751.16Serine/threonine-protein kinase WNK2 OS=Arabidopsi... [more]
WNK9_ARATH2.104e-1650.00Probable serine/threonine-protein kinase WNK9 OS=A... [more]
WNK1_ARATH2.747e-1651.14Serine/threonine-protein kinase WNK1 OS=Arabidopsi... [more]
WNK3_ARATH2.177e-1355.22Probable serine/threonine-protein kinase WNK3 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC06002E05SK RindPdig24 Citrus clementina cDNA clone C06002E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297532 ID=CX297532; Name=CX297532; organism=Citrus clementina; type=EST; length=671bp
GAATTCGGCACGAGGAGTGCCAAAGTTTGCGGTTGATTCTGATCGAAGGA
AGAGTACTGATATGACCATAACAGGCACAATGAATCCTGAAGATGATACA
ATTTTCCTGAAAGTACAGATTACAGACAAAGATGGTCAAGCTAGAAACAT
ATACTTCCCCTTTGACATTTTCAATGATACTGCAACTGAAGTTGCCTTGG
AGATGGTGAAAGAATTGGAGATTACTGATTGGGAACCACTTGAAATTGCT
GAAATGATAGAGCAAGAAATATCTTCTTTGGTCCCGAATTGGAAGGAATG
TGGCTCTCCTCAATTCTGTCATCAACACAGCTTTAGCTATGAAGATGAAG
ATGATGACAATGACGACGATGGAATCTACCACCCTTTCTACTCTAACTCT
TCCCATTCCTCGTCGCACGCTTCTCTCCCAGCTTTCTTCACAAACAATGC
GAATTCTCCTCCCAGTTGGCTTCAACAAGAAGACTTGTTGGGCAATGATG
ATGCGAGTTCCAATGGTTCTGTTAGTTCTTTCAAGTACTCAAGCTGGGAT
TACCACTCAGGCAATGAAGATGATTCTGAGTTCAGCCACAGAGCAGGAGA
GCCACTCTGCATTGCAAGGGCAACTCAAAAATCTACAAGATTCTGCCCTG
AAGCTGCTATGAACAATGACC
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