CX297539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.537e-31 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 3 Query: 3 YQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEDDE 239 YQSHF+EYIKKGI+AD LE LYKKVHAAIRA+P KKS+KP PK HKRYNLKKLTY+ERKA+LVERLNALNSA D DD+ Sbjct: 218 YQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDDD 296
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 4.050e-29 Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 3 Query: 3 YQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEDDE 239 +Q+HF+EY+KKGIDADG+EALYKKVHAAIRADPT KS K P HKRYNLKKLTYE+RKA LVERLNALNS+ DD+ Sbjct: 219 FQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 4.050e-29 Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 3 Query: 3 YQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEDDE 239 +Q+HF+EY+KKGIDADG+EALYKKVHAAIRADPT KS K P HKRYNLKKLTYE+RKA LVERLNALNS+ DD+ Sbjct: 219 FQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.023e-29 Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 3 Query: 3 YQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEDDE 239 +Q+HF+EY+KKGIDADG+E+LYKKVHAAIRADPT KS K P HKRYNLKKLTYE+RKA LVERLNALNS+ DD+ Sbjct: 219 FQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 3.791e-27 Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = 3 Query: 6 QSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEDDE 239 Q+HF+ YIKKG++A+ +E LYKKVHAAIRADP KK+ KPAPK+HKRYNLKKLTYEERK KL+ER+ ALN A +DD+ Sbjct: 219 QTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDD 296
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 1.441e-26 Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = 3 Query: 6 QSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEDDE 239 Q+HF+ YIKKG++A+ +E +YKKVHAAIRA+P KK+EK APKEHKRYNLKKLTYEERK KL+ER+ ALN A +DD+ Sbjct: 219 QTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDD 296
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.191e-26 Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 3 Query: 3 YQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEDDE 239 YQSHF+ YIK + D +E +YKKVHAAIR DP+ KKS+K PK HKRYNLKKLTYEERKAKL+ERLNALN+A DD+ Sbjct: 37 YQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGGNDDD 115
BLAST of CX297539 vs. ExPASy Swiss-Prot
Match: RL5_BOMMO (60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.496e-11 Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 YQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTTKKSE-KPAPKEHKRYNLKKLTYEERKAKLVER 200 ++ F++YIK G+ AD +EA+YKK H AIRADP+ KK E K + KR+N +KLT ERK ++ ++ Sbjct: 219 FKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQK 285 The following BLAST results are available for this feature:
BLAST of CX297539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297539 ID=CX297539; Name=CX297539; organism=Citrus clementina; type=EST; length=486bpback to top |