CX297547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_PODAN (40S ribosomal protein S15 OS=Podospora anserina GN=RPS15 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.326e-67 Identity = 128/153 (83.66%), Postives = 134/153 (87.58%), Query Frame = 1 Query: 49 MADIEYNAEEAAEIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 MAD EYNAEEAAE+KK+R FRKFSYRG+ VVHARARR+ NRGLKR+PMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSV+GIYSGKEFNQVEIKPEMVGHYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 1 MAD-EYNAEEAAELKKKRTFRKFSYRGVDLDALLDLTSDELRDVVHARARRKINRGLKRRPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVVGIYSGKEFNQVEIKPEMVGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 152
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.712e-55 Identity = 105/153 (68.63%), Postives = 120/153 (78.43%), Query Frame = 1 Query: 49 MADIEYNAEEAAEIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 MAD+ + K+R FRKFSYRG+ + HARARRRF RGLKRKPM LIKKLRKAK++A P EKP+ V+THLR+MI+VPEMIGS+IG+Y+GK FNQVEIKPEM+GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 1 MADVSDAVDVGGAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.229e-54 Identity = 105/154 (68.18%), Postives = 122/154 (79.22%), Query Frame = 1 Query: 49 MADIEYNAEEAAEIK-KRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 MAD+E E AA + K+R FRK+SYRG+ + ARARRRF RGLKRKPM LIKKLRKAK++A EKP+ V+THLR+MI+VPEMIGS++G+Y+GK FNQVEIKPEM+GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 1 MADVEVETEVAAGAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.570e-53 Identity = 100/138 (72.46%), Postives = 114/138 (82.61%), Query Frame = 1 Query: 94 KRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 K+R F+KFSYRG+ + HARARRRF RGLKR+PM LIKKLRKAK+EA EKP+ V+THLR+MI+VPEMIGS+IG+Y+GK FNQVEIKPEM+GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 14 KKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.500e-51 Identity = 99/153 (64.71%), Postives = 120/153 (78.43%), Query Frame = 1 Query: 49 MADIEYNAEEAAEIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 MAD+E AA + K+R F+KF+++G+ + +R RRRF+RGL RKPM LIKKLRKAK+EA EKP+ V+THLR+MI+VPEMIGS+IG+Y+GK FNQVEIKPEM+GHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK Sbjct: 1 MADVEPEVA-AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.500e-51 Identity = 99/153 (64.71%), Postives = 120/153 (78.43%), Query Frame = 1 Query: 49 MADIEYNAEEAAEIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 MAD+E AA + K+R F+KF+++G+ + +R RRRF+RGL RKPM LIKKLRKAK+EA EKP+ V+THLR+MI+VPEMIGS+IG+Y+GK FNQVEIKPEM+GHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK Sbjct: 1 MADVEPEVA-AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_RAT (40S ribosomal protein S15 OS=Rattus norvegicus GN=Rps15 PE=1 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50 Identity = 94/141 (66.67%), Postives = 113/141 (80.14%), Query Frame = 1 Query: 85 EIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 E KK+R FRKF+YRG+ + AR RRR NRGL+RK L+K+LRKAK+EA P EKP++VKTHLRDMI++PEM+GS++G+Y+GK FNQVEIKPEM+GHYL EFSI+YKPVKHGRPGIGATHSSRFIPLK Sbjct: 5 EQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_PONAB (40S ribosomal protein S15 OS=Pongo abelii GN=RPS15 PE=2 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50 Identity = 94/141 (66.67%), Postives = 113/141 (80.14%), Query Frame = 1 Query: 85 EIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 E KK+R FRKF+YRG+ + AR RRR NRGL+RK L+K+LRKAK+EA P EKP++VKTHLRDMI++PEM+GS++G+Y+GK FNQVEIKPEM+GHYL EFSI+YKPVKHGRPGIGATHSSRFIPLK Sbjct: 5 EQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_PIG (40S ribosomal protein S15 OS=Sus scrofa GN=RPS15 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50 Identity = 94/141 (66.67%), Postives = 113/141 (80.14%), Query Frame = 1 Query: 85 EIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 E KK+R FRKF+YRG+ + AR RRR NRGL+RK L+K+LRKAK+EA P EKP++VKTHLRDMI++PEM+GS++G+Y+GK FNQVEIKPEM+GHYL EFSI+YKPVKHGRPGIGATHSSRFIPLK Sbjct: 5 EQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
BLAST of CX297547 vs. ExPASy Swiss-Prot
Match: RS15_MOUSE (40S ribosomal protein S15 OS=Mus musculus GN=Rps15 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50 Identity = 94/141 (66.67%), Postives = 113/141 (80.14%), Query Frame = 1 Query: 85 EIKKRRQFRKFSYRGIXXXXXXXXXXXXXXXVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 507 E KK+R FRKF+YRG+ + AR RRR NRGL+RK L+K+LRKAK+EA P EKP++VKTHLRDMI++PEM+GS++G+Y+GK FNQVEIKPEM+GHYL EFSI+YKPVKHGRPGIGATHSSRFIPLK Sbjct: 5 EQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145 The following BLAST results are available for this feature:
BLAST of CX297547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297547 ID=CX297547; Name=CX297547; organism=Citrus clementina; type=EST; length=660bpback to top |