CX297553

Overview
NameCX297553
Unique NameCX297553
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length148
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14256 contig Ccv1_Contig14256:18..165. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
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BLAST of CX297553 vs. ExPASy Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.164e-21
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = -3 
Query:   12 KFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 146
            KF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Sbjct:    6 KFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 50
The following BLAST results are available for this feature:
BLAST of CX297553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M030_ARATH8.164e-2197.78Uncharacterized mitochondrial protein AtMg00030 OS... [more]
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Properties
Property NameValue
Genbank descriptionC06002G03SK RindPdig24 Citrus clementina cDNA clone C06002G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297553 ID=CX297553; Name=CX297553; organism=Citrus clementina; type=EST; length=148bp
ATTCGGCACGAGGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGG
CCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGT
ATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAG
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